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Information for unigene UN21112

FASTA Sequence
Unigene ID: UN21112Length: 1185 SSRSNP
ATCTCAAAACCAACAAAAACAAAAAAAAAAATTCAAATCCCTAAAAAGATGTCGACGGAGGAAGAACCCAAGGTCGTGGAGTCAGG
AGACGCCGAAGCCGAAGCCGAAGCCACGGTGACGACGACGGAGAAGAAACCTGCTAAAGCCAAAGCTAAGAAGACGAAGGAAGCTA
AGAAGAAGCCTGCTGCTGCTGCTGCACCGAGGAAGAGAACCACTTCGTCTCATCCTCCTTACGAAGAGATGATAAAGGATGCGATC
GTGACGTTGAAGGAGAGGACCGGATCTAGCCAATACGCGATTCAGAAGTTCATCGAGGAGAAGCACAAGTCGCTTCCTCCTACTTT
CAGGAAGCTTCTCCTCGTCAATCTCAGGAGACTCGTCGCTTCCGGGAAGCTCGTCAAAGTCAAAGCCTCTTTCAAGATTCCGTCTG
CTAAACCGGCTGCGGCGACGAAACCGGTTAAGAAGAAACCGGCTGCTGCTGTTACTAAACCGAAGGGTAAAGCAGCTGCTGCTCCT
GCTAAGGCCAAACCAGCTGCTAAAGGAACCAAGAAACCTGCTGCTTCTGCTGCTAAGCCTAAGGCAAAGACAACGACAACTAAAGC
TGCTGCGAAGCCGAAAGTTACTGCGAAGCCTAAGACGAAGAGTGTAGCTGCTGTCTCCAAGACTAAAGCTGTTGCTGCTAAGCCTA
AGGTGAAGGAGAGACCTGCTAAAGCTTCGAGGACTTCGAGTAGGACGTCTCCAGGGAAGAAGGCTGCTCCCGCTAAGAAAGCGGCT
GCGCCTGCGGCTAAGAAAGCTGGTGCGAGTAAGAAGGCTCCGGCTAAGAGTGCGAAGGTGAAGTCTCCAGCGAAAAGAGCTTCGAC
GAGGAAGAAGTGATGATGGTTTCGCTTCTCTTAGGGTTAAAGTCTTTTGTATAATTGAAATCGTCTATGAAGGGGGCTTGTTTTTT
CTTTTACTTCCAAAGTTTTATCTTTTGTTATATTTGTCTTTGGTTTCTTCTCGAAACCCCTTTTATCTTGTAATTTTTGGGTTGTT
TGAAATTTTAATAGCTCTATATGTGATGGTCTGCAAAGACGTGCTTGTGCTTTGTATCAATGTCTTTAAAGAGGAACTCGTCTCTC
TTTCTCTTTAAGGGCAACAAACTTAGCAATGCCCATTCTTTCTTTGTTTAGAGAGTTTCTGCAAGGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_180620 histone H1.2 [Arabidopsis thaliana]8338e-087
XP_002879272 hypothetical protein ARALYDRAFT_481979 [Arabidopsis lyrata subsp. lyrata]7737e-080
BAH57180 AT2G30620 [Arabidopsis thaliana]6975e-071
XP_002302069 histone H1 [Populus trichocarpa]6698e-068
XP_002892357 expressed protein [Arabidopsis lyrata subsp. lyrata]6511e-065

Swiss-Prot top hits (Blast detail)Scoree value
P26569 Histone H1.28414e-089
P26568 Histone H1.16471e-066
P37218 Histone H15403e-054
P08283 Histone H15172e-051
P27806 Histone H14642e-045

TrEMBL top hits (Blast detail)Scoree value
C0Z3A1 AT2G30620 protein6973e-071
B9GS56 Histone H16696e-068
B9H8I5 Histone H16176e-062
Q40509 Histone H15773e-057
Q9SLS1 Histone H15746e-057

Arabidopsis top hits (Blast detail)Scoree value
AT2G30620.1 histone H1.28432e-090
AT1G06760.1 histone H1, putative6551e-068
AT2G18050.1 HIS1-3 (HISTONE H1-3); DNA binding / nucleosomal DNA binding2634e-023
AT2G18050.2 HIS1-3 (HISTONE H1-3); DNA binding / nucleosomal DNA binding2008e-016
AT3G18035.1 HON4; DNA binding1622e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
124  29%
 
105  36%
 
205  36%

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