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Information for unigene UN21114

FASTA Sequence
Unigene ID: UN21114Length: 1344  SNP
GGATCAGAAAATATGAAAAACAAATCCCAAATCGAAGCAGCTCCGGCTCAGCAGCAGGGAAGTATGTTTTCTTTTTTCAATTTGTT
CCCTTTTCTCCTCCCGACATTTGAGGTTATCAAGATGGTTGTTGCTTCCGTCGCCTCAGCAGTCTATTTAGGCTTCGCCGGTGTAA
CACTCAGTGGTTCAGCCGTGGCATTAGCCGTATCTACCCCCCTTTTCATCATATTCAGTCCGATTCTCTTACCTGCCATTGCAGCC
ACTACTGTCCTAGCCGCTGGGCTCGGCGGTAAAAAAGCGGATCAGCAGGCTCAGGCAGGTTCGCCGTCCCTATCTCTGTTGGGCAT
ACCAGAGGCTATTAAACCAAGTAATATTATACCAGAGGCTGTTAAACCAAGTAATATTATACCAGAGGCTGTTAAACCAAGTAATA
TTATACCAGAGGGTATTAAACCAAGTACTATTAAGGACAAAATCAAGGAAACGATAGGCAAAGTCAAGAATAAGATCAAAGAGAAA
AAGGAAGAAAAATCTAAAGAAAAAGGTAAATCTGGAGGTGGAGGTTCTCCTAAGGGTGAAGATTCGTCTTCTTCGGATGAGAGTAA
ACACAAGAGTGAAGGTAAACACGGAAAGGGTGAGAGTAAACACGAAGGCGGAGGTAAACATGGAGGTGGAGGTTCGTCAATGGATA
AAGGTAAGCACGGAAGCGGAGTAAACATGGAAGTGGAGGTTCGTCGACGATGAAGCTAAGCATGGAGGTGGAGGTAAACACGGAAG
TGGAGGTTCATCAATGGGTGGAGACAAACACGGAAGTGGAGGCAAACACGAGAGTGGAGGCAAACATGGAAGTGGAGACAAACACG
GAAGTGGAGGTTCGTCAATGGGTGAAGGTAAACACGGGGGTGGAGGCTCTTCTAAAAAGGAGAAAAAAGAATTCCATTATGCAGGT
TCATCTATGGATGCAAGTAGTTCAAGTGAAAGTTCAGATGGAAGTTCAGATGGAAGTTCAGATGGTGAAAGTTCACATGGGAGTGG
TGGTAAACACATGTGAGTAAACGTGAATTCATGGAAGAATAAAAGACATTGGTGGACCTATTCCAATGTTTAGCATATGACGTGTC
ATGAATTGTACGGCATTGTAAGGGAAAAAAAACTTTTTACAATTTTTATGTTAATATATGTAATGGTTAAAACTGATTAATATGAT
AAGACAGAAAGACTATTATGATACAATGTATAGTGAAAATATAAAAATAATGTAATGTGGTAACAATTATTTCCATTCCTTCTTGA
AAGGATCTGGTTTAGCTAGCTTCCGATATTTAATTATAGAAATTTAATACTTAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAA65272 pollen coat oleosin [Brassica oleracea]8373e-087
CAA65273 pollen coat oleosin [Brassica oleracea]8373e-087
AAR13696 pollen coat oleosin-glycine rich protein [Brassica oleracea]8373e-087
CAA65271 pollen coat oleosin [Brassica oleracea]8364e-087
CAA65270 pollen coat oleosin [Brassica oleracea]8266e-086

Swiss-Prot top hits (Blast detail)Scoree value
Q42626 Oleosin-B38012e-084
Q42627 Oleosin-B47951e-083
Q43402 Oleosin-B62662e-022
P29526 Oleosin-B2 (Fragment)2223e-017

TrEMBL top hits (Blast detail)Scoree value
Q42637 Oleosin8372e-087
Q42640 Oleosin8372e-087
Q6V5K1 Oleosin8372e-087
Q42639 Oleosin (Fragment)8363e-087
Q42638 Oleosin (Fragment)8264e-086

Arabidopsis top hits (Blast detail)Scoree value
AT5G07530.1 GRP17 (GLYCINE RICH PROTEIN 17); lipid binding3083e-028
AT5G07530.2 GRP17 (GLYCINE RICH PROTEIN 17); lipid binding3083e-028
AT5G07600.1 oleosin / glycine-rich protein1945e-015
AT5G07520.1 GRP18 (GLYCINE-RICH PROTEIN 18); lipid binding / nutrient reservoir1847e-014
AT5G07510.1 GRP14; lipid binding / nutrient reservoir1811e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
83  18%
 
106  35%
 
61  6%
 
122  12%
 
75  29%

Unigene MembersMember information