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Information for unigene UN21117

FASTA Sequence
Unigene ID: UN21117Length: 1630  SNP
GAGACGTCGCGTCATCACACCACCGATCTCTCTAGACGGTCTTGCCTCCTTCCTCCTACCAAAAAAACAAAGTCAATCTTTCTTTA
GCAGATCATCAGCCATCATCATGGATGAAGAGTACGAAGTTATCGTTCTCGGTACTGGTCTCAAGGAGTGCATCCTCAGTGGTCTC
CTCTCCGTCGATGGTATCAAGGTACTTCACATGGACAGGAATGACTATTACGGTGGAGAGTCAACATCACTTAATCTCAATCAGCT
GTGGAAGAAGTTTAGGGGAGAAGATAAGGCTCCTGCTCATTTAGGCTCTAGCAGAGACTACAATGTTGACATGATGCCCAAGTTTA
TGATGGCGAATGGCAAGCTTGTCCGCGTCCTCATTCATACTGATGTGACCAAGTACCTGTCTTTTAAGGCTGTTGATGGGAGCTAT
GTCTTCGTCAAAGGCAAGGTTCAAAAGGTGCCAGCAACTCCAATGGAAGCCCTGAAATCTCCTCTTATGGGTATTTTTGAGAAACG
TCGTGCTGGAAAGTTCTTCAGCTATGTTCAGGAGTATGATGAGAAGGATCCTAAAACACACGATGGAGTTGATTTGAAGAGAGTCA
CTACCAAGGAGTTGATTGCGAAATTCGGTCTTGATGAAAACACTATTGACTTTATTGGTCATGCTGTGGCACTTCACAGTAATGAT
AGCCATCTCCATCAACCTGCTTATGATACTGTGATGAGAATGAAGCTCTACGCAGAGTCCCTTGCTCGTTTCCAAGGAGGTTCACC
ATATATCTATCCTCTCTATGGGCTGGGTGAATTGCCTCAGGCATTTGCACGACTAAGTGCTGTGTATGGTGGGACTTACATGTTGA
ATAAACCTGAGTGCAAGGTAGAGTTCGATGAGGAAGGTAAGGTTATGGGTGTTACGTCTGAGGGAGAGACTGCAAAATGCAAGAAA
GTTGTCTGCGATCCTTCATACCTGCCCAACAAGGTGAGGAAGATTGGCAAGGTTGCTAGGGCAATTGCCATTATGAGCCACCCTAT
TCCAAACACCAATGATTCTCACTCGGTGCAAGTCATCCTACCTCAAAAGCAATTGGGCCGCAAATCAGACATGTATGTCTTCTGTT
GTTCGTATTCCCACAACGTTGCTCCCAAGGGAAAGTTCATAGCATTTGTGTCGACGGACGCAGAGACGGATAACCCGCAAACCGAG
CTGAAGCCTGGAATCGACCTTTTTGGTCAAATTGATGAGCTGTTTTTCGACATTTATGATAGATACGAGCCTGTCAACGAACCCAC
TTTGGACAACTGCTTCATATCAACGAGTTATGATGCTACAACACACTTTGATACAACGGTTGTTGATGTGTTGAACATGTATAAAT
TGATCACGGGAAAGGAACTGGATCTAAGTGTGGACCTTAACGCAGCTAGTGCTGCAGAGGAATGATGGAGAATAATGCAAGCTCTC
TAGTCAAAACAACTTGGTGTACTGGTTGTCTTTGTCCCCACCCTTAAACGTTCTCACTTGTTTCCCCCCTTCATGTTGTCTGTTTA
AACTCGAAATCAGATTGATCTCATCATGTTCCTGGTTATATAACAGTGTCTGTTTCTTTCTTAAAATCAAAAATGTTGGATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAF81523 GDP dissociation inhibitor [Brassica rapa]23043e-257
XP_002880083 ATGDI1 [Arabidopsis lyrata subsp. lyrata]22506e-251
NP_181938 guanosine nucleotide diphosphate dissociation inhibitor 1 [Arabidopsis thaliana]22452e-250
CAA69258 GDP-associated inhibitor [Arabidopsis thaliana]22409e-250
AAL38263 GDP dissociation inhibitor [Arabidopsis thaliana]22344e-249

Swiss-Prot top hits (Blast detail)Scoree value
P21856 Rab GDP dissociation inhibitor alpha13041e-142
P50395 Rab GDP dissociation inhibitor beta13041e-142
P31150 Rab GDP dissociation inhibitor alpha13032e-142
P60028 Rab GDP dissociation inhibitor alpha13032e-142
P50398 Rab GDP dissociation inhibitor alpha13032e-142

TrEMBL top hits (Blast detail)Scoree value
A8CF56 GDP dissociation inhibitor23042e-257
Q96254 At2g44100/F6E13.2322452e-250
Q96284 GDP-associated inhibitor22406e-250
Q8LBY8 GDP dissociation inhibitor22343e-249
Q8VZB4 GDP dissociation inhibitor22343e-249

Arabidopsis top hits (Blast detail)Scoree value
AT2G44100.1 ATGDI1 (ARABIDOPSIS THALIANA GUANOSINE NUCLEOTIDE DIPHOSPHATE DISSOCIATION INHIBITOR 1); RAB GDP-dissociation inhibitor22459e-253
AT3G59920.1 ATGDI2 (RAB GDP DISSOCIATION INHIBITOR 2); RAB GDP-dissociation inhibitor21732e-244
AT2G44100.2 ATGDI1 (ARABIDOPSIS THALIANA GUANOSINE NUCLEOTIDE DIPHOSPHATE DISSOCIATION INHIBITOR 1); RAB GDP-dissociation inhibitor21722e-244
AT5G09550.1 RAB GDP-dissociation inhibitor18622e-208
AT3G06540.1 GDP dissociation inhibitor family protein / Rab GTPase activator family protein1337e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
105  42%
 
81  8%
 
114  33%
 
212  17%

Unigene MembersMember information