Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN21119

FASTA Sequence
Unigene ID: UN21119Length: 870  SNP
GGGACATCATTATTGAATTAGCTAAAAAAAACTATTAAAACAGAGTCCAATGGCGGAGGATCAAGCAACGGCGGCGATGGAAACAT
TGGCGGTGGAGAAGCAGCCGGAGACGACAGTGGCTGAAGCACCGGCAGTGACAATAACAAAGAGGATGATGGTTGCTATCGACGAG
AGTGATTCGAGCTTCTATGCTCTTCAATGGGTTATTGACCATTTCTCTAACCTCTTAATGACCACTGAGGCGGCTCAAGCGGAAGG
TGGCTTGCTCACGGTGGTTCATGTGCAGTCTCCGTCCCATCACTTTGCTGCTTTTCCGGCTGGACCCGGCGGCGCAACAGTCTACG
CATCTTCGTCGATGATAGAGTCAGTGAAAAAAGCACAACAGGAGGCCTCTGCAGCCCTTCTCTCGCGTGCACTCCAGATGTGCCGA
GACAAGCAGATACGTACTGAGACTATGGTGCTTGAAGGCGACGCAAAGGACATGATTTGCCAGGCGGTTGAGCAAATGCACGTTGA
TCTTCTCGTTGTGGGTAGTCGTGGCCTTGGAAAGATCAGAAGAGCGTTTATTGGGAGCGTTAGCGACTACTGTGCTCATCACGCCA
ACTGTCCCATCCTTATTGTGAAGCCACCAAAGGAGATAAACTAATTAAGTAACAACATGTTTGGTGTGATATGTCTTTATAAATTG
TGTCAAGTACTTGCGTTATGTTTGAAGATATTTAACCTTGGATGGATGCGATATTAAGTGTGTGTTGAAGAGTAATGTCAATTACA
TGAATCGAGTCGAATAATTGCTGCAATGTATTTATAATCGATTGTACGTTTATTGCTTGTCTGAATATGTTCCGTATCTCTCCCTG
TAATATGGAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_566406 adenine nucleotide alpha hydrolases-like protein [Arabidopsis thaliana]8586e-090
XP_002882756 universal stress protein family protein [Arabidopsis lyrata subsp. lyrata]8578e-090
NP_850562 adenine nucleotide alpha hydrolases-like protein [Arabidopsis thaliana]8462e-088
NP_001030675 adenine nucleotide alpha hydrolases-like protein [Arabidopsis thaliana]8452e-088
AAM66054 ethylene-responsive protein, putative [Arabidopsis thaliana]8452e-088

Swiss-Prot top hits (Blast detail)Scoree value
Q8LGG8 Universal stress protein A-like protein2014e-015
P42297 Uncharacterized protein yxiE1361e-007
P74148 Uncharacterized protein sll13881343e-007
O07552 Stress response protein nhaX1316e-007

TrEMBL top hits (Blast detail)Scoree value
Q3EB80 Putative uncharacterized protein At3g11930.18584e-090
Q9SF06 AT3g11930/MEC18.38461e-088
Q2V3W9 Putative uncharacterized protein At3g11930.48451e-088
Q8L9C2 Ethylene-responsive protein, putative8451e-088
Q3EB79 AT3G11930 protein7025e-072

Arabidopsis top hits (Blast detail)Scoree value
AT3G11930.1 universal stress protein (USP) family protein8583e-092
AT3G11930.2 universal stress protein (USP) family protein8466e-091
AT3G11930.4 universal stress protein (USP) family protein8458e-091
AT3G11930.3 universal stress protein (USP) family protein7023e-074
AT3G58450.1 universal stress protein (USP) family protein5016e-051

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
84  50%
 
102  25%
 
122  25%

Unigene MembersMember information