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Information for unigene UN21120

FASTA Sequence
Unigene ID: UN21120Length: 860 SSRSNP
GGATATAAGTGTCGCAGAAAAATAATACATCATCGTGAAACGTTGAAAGGCCATCAGAGCTAAGATCTCCTGCGGCGTTGTTTCTT
CGGTTTGGAAAAAAAAAGGATGGGGTTGTCATTTGGGAAACTGTTCAGCAAGCTGTTTGCGAAGAAAGAGATGCGTATTCTGATGG
TGGGTCTTGATGCTGCTGGTAAGACTACCATCCTCTACAAGCTCAAACTTGGTGAGATCGTCACCACTATCCCTACCATTGGTTTC
AATGTTGAAACTGTGGAATACAAGAACATCAGCTTTACCGTCTGGGATGTCGGGGGTCAGGACAAGATCCGTCCATTGTGGAGACA
CTACTTCCAGAACACACAGGGACTTATCTTTGTTGTGGACAGCAACGATCGCGACCGTGTTGTTGAAGCCAGGGACGAGCTTCACA
GGATGTTGAACGAGGATGAGTTGAGGGATGCAGTTCTGCTTGTCTTTGCTAACAAACAAGATCTTCCCAACGCAATGAACGCTGCT
GAGATTACTGACAAGCTTGGCCTTCACTCTCTCCGCCAACGACACTGGTACATTCAGAGCACATGTGCCACCTCTGGAGAAGGACT
CTACGAGGGACTTGACTGGCTCTCCAACAACATCGCAAACAAGGCATAGAAACATGGTAGCAGGATTCCTCTTCACTTGTTTTCTC
ATACCTTCTTCTTCTTCTTCTTCTTCAATTCTCAGTCTCAAAACTGAAAACCATATCATACTTTGTACTTTCATTTAACAACACTA
TGTTTCTTTGTTTTTGTTTTTGTTCTTCCTTAGTTGTAAAAAAAACCTTTTGTTTCTTCTTTTTAACCGGATATTTACTTTTGGGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_191788 ADP-ribosylation factor A1E [Arabidopsis thaliana]9402e-099
CBI25984 unnamed protein product [Vitis vinifera]9392e-099
AAF65512 ADP-ribosylation factor [Capsicum annuum]9374e-099
ABA40455 ARF-like small GTPase-like protein [Solanum tuberosum]9331e-098
XP_002876669 ADP-ribosylation factor [Arabidopsis lyrata subsp. lyrata]9331e-098

Swiss-Prot top hits (Blast detail)Scoree value
P36397 ADP-ribosylation factor 19327e-100
Q9SRC3 ADP-ribosylation factor 29255e-099
P51823 ADP-ribosylation factor 29221e-098
O48920 ADP-ribosylation factor9202e-098
Q06396 ADP-ribosylation factor 19174e-098

TrEMBL top hits (Blast detail)Scoree value
A1YN05 ADP-ribosylation factor-like protein9401e-099
Q9M1P5 ADP-ribosylation factor-like protein9401e-099
Q6EFV6 ARF-like small GTPase9373e-099
Q9M7P4 ADP-ribosylation factor9373e-099
Q3HVL9 ARF-like small GTPase-like protein9339e-099

Arabidopsis top hits (Blast detail)Scoree value
AT3G62290.1 ATARFA1E (ADP-ribosylation factor A1E); GTP binding / phospholipase activator/ protein binding9416e-102
AT2G47170.1 ARF1A1C; GTP binding / phospholipase activator/ protein binding9335e-101
AT1G10630.1 ATARFA1F (ARABIDOPSIS THALIANA ADP-RIBOSYLATION FACTOR A1F); GTP binding / copper ion binding / phospholipase activator/ protein binding9273e-100
AT1G70490.1 ARFA1D; GTP binding / phospholipase activator/ protein binding9263e-100
AT1G23490.1 ATARF1 (ADP-RIBOSYLATION FACTOR 1); GTP binding / phospholipase activator/ protein binding9263e-100

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  15%
 
64  31%
 
122  15%
 
74  31%
 
81  8%

Unigene MembersMember information