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Information for unigene UN21123
| FASTA Sequence |
| Unigene ID: UN21123 | Length: 1156 |
| SNP | CATGCCATTAACTCTTCCACTACAATACCAGTCTATTGGAGTAGTAGTCCATTACATAAGATTTAGAGAAGTATTGCATCCACAAA
GAAAAAGATCTCAATTGTAACAATTATTTGTGACAAGTCTGCAACCTCTATTTCTCAATCTTAGTGGAACTTATACATAACAGGAA
TACTAAAATTTTCTGCAACCATTTTTAACCTTGCTTTTCACGTCATTTAAAATCTGTCATTCATCATTCATAGGTTATAAGCTTGA
GAGCTTCTCCATCATGAATCTTCGTAGTCGTTCTAATATTCCGTATCCCGTCGTGACTAATAGCCTTGTATAGACGGGGATGTTGG
GCATCCACGAACTCACTAGGCGGCTCCAAATCTGTATCAATCGGTCCTAACAAAAAAGAAGCGATAGAAAACCTCTTCGTCGCTTC
GTTGCATTGCACTCTATGCTTCACGTTGCACAACCTCCCATTGCTCCATATCGTAGCCATGTCGCCGAGGTTGATAGCCAAAGTGT
TCGGCAAGGGGCTAATGGGAAAGAACGTTCCCGAAGAATGGTCCATAGCTTCGAGCCCACCGACGTTTTCGTCGTCTTGAAGAATC
GTCAAGAAGCCTGAATCGGTGTGTAACTGGACACCGAGTTTCCCGACCGTTTCTGGTTGGAAATGATACTTGTTGATCCGGAACTG
GCTCGGCCATCCTTCGAAGAAGTTGGTCTCGGCTAAGCCGTAGCTCTCTGCTAACCTCCTTGCTAGATCCTTTGCAAGTCCATCGA
TAGCTTTCGCATATTTTACCATTATGTCCCTTTGATCCACAGAAGCCTCGAGCTGGTCACAAAACGTGTTGACTGCTCGAGGAGAA
GCCATGTCGTAGAGACCTAACGCTTCGTAATAAGGATTAATTTCGTTAGGAGCCCTGTAACCACTCCCTAGTAACACGTCTGTGTT
ACGCACTTTCACCTCGTGCGGACGTTCGAAGAGATCGATAACGGTCTTCTTCATGTCAGACATCAAAGACAGTGGAACTCCATGGT
TGATCGCTCTGAAACATCCCCATCTCTCGCTCGTTTCTCGGATTTTCTGGTTCAGGATCTTGTCTGAAACCTCCCCCAAGTCTATC
GTCGGGATAATAACAACTCCGTTGGTTTTCGCCATTAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_172865 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein [Arabidopsis thaliana] | 1404 | 5e-153 |
| XP_002892789 hypothetical protein ARALYDRAFT_471571 [Arabidopsis lyrata subsp. lyrata] | 1383 | 1e-150 |
| NP_172864 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein [Arabidopsis thaliana] | 1163 | 4e-125 |
| XP_002892788 hypothetical protein ARALYDRAFT_334706 [Arabidopsis lyrata subsp. lyrata] | 1163 | 4e-125 |
| XP_002528538 Gibberellin 3-beta-dioxygenase, putative [Ricinus communis] | 930 | 4e-098 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O49561 Gibberellin 2-beta-dioxygenase 8 | 267 | 1e-022 |
| Q09052 1-aminocyclopropane-1-carboxylate oxidase | 236 | 6e-019 |
| P31237 1-aminocyclopropane-1-carboxylate oxidase | 215 | 2e-016 |
| P54847 1-aminocyclopropane-1-carboxylate oxidase 3 | 214 | 2e-016 |
| O04707 Gibberellin 20 oxidase 1-A | 212 | 3e-016 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9XI75 F7A19.21 protein | 1404 | 3e-153 |
| Q9XI76 Dioxygenase-like protein | 1163 | 3e-125 |
| B9SRB9 Gibberellin 3-beta-dioxygenase, putative | 930 | 3e-098 |
| Q2Z1Y9 2-oxoacid-dependent dioxygenase | 912 | 4e-096 |
| A5AW66 Putative uncharacterized protein | 894 | 5e-094 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G14130.1 2-oxoglutarate-dependent dioxygenase, putative | 1404 | 2e-155 |
| AT1G14120.1 2-oxoglutarate-dependent dioxygenase, putative | 1163 | 2e-127 |
| AT1G55290.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 284 | 1e-025 |
| AT4G21200.1 GA2OX8 (GIBBERELLIN 2-OXIDASE 8); gibberellin 2-beta-dioxygenase | 267 | 1e-023 |
| AT3G21420.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 260 | 8e-023 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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