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Information for unigene UN21133

FASTA Sequence
Unigene ID: UN21133Length: 1247 SSR 
TTTTTCAGACCGAACACGAAAACAAAACACGAGTTTAAAGAGATTCATTTGAGCTGAAGGATTCAAGAATTCGAAAGACTTCGATT
CCAGAATCATTTCTAGATCAATAAGGTTGTATCATTGGTGGCTAAAGTTAAAGCATGTCCGATCATCTGAGTTTATGTACGGATCG
TCTCATAACTGCTGCTGAGAGCCTGAAGTCAGAAAAAGATGCTGATTCTTCTGGAGAGACTTGCACGAACTTGGCTTCTTCTTCTT
CATCTACGAATGAAGCTGAGGTAGTAGCGAGGGAGTACTATGCTGCCGTTGAGGAAGAGGAACCACTTCTCCAGTCTGTTGAGTGC
CGTATTTGCCAGGAGGAAGATACCACTAAGAACCTGGAGGCTCCTTGTAGTTGTAGTGGCAGTTTGAAGTATGCCCATCGCAAGTG
TGTTCAGCGTTGGTGTAATGAGAAAGGCGACATAACTTGCGAAATATGCCACCAGGCTTATCAACCTGGATATACAGCACCTCCTC
CTCCTCCTCCTGATGAAACAATAATTCACATTGGTGACAACTGGGAGAATGGAGTTCCCTTGGACTTGAGTGACCCACGCATCCTG
GCAATGGCTGCAGCAGAACGCCATTTCTTGGAAGCTGACTATGACGACTACTCTGAGTCTAACTCTAGCGGAGCTGCCTTTTGCCG
CTCTGCTGCTCTCATCCTAATGGCACTTTTACTGCTACGTGATGCCCTAAACCTCACAGCTAACCCAGATGACGAGGACGACCCAA
CAGCCTTCTTCTCGCTTTTTTTTTTTCGTGCTTCCGGATTTCTCCTGCCATGCTACATCATGGCATGGGCCATCGGTATACTCCGA
CGCCGGAGGCAAAGACAGGAAGCAGCTGTAGCTGCGGCGGAAGTTGCTTTTATGATACACGGTGGTGTGCCTCCCCAACGCAGGGG
ACTTCACTTTGCTGTAGTACCACCAGAGCAGCCGCCCATACCCAACCAAACACCCCCTGTCTGATCTTTCAAGGCAATTTGATTCT
CCGGTAAGACTATTTATTACTAAAGAAAGAAACTGTGAACTTGGTTGTTAAAAGAAAAGAACGTCCCACCTACTTATGCTTCTTCA
CGTGCTTTATCATCATCTTCCTCATATGTTTGTGTTCTCTGAATCTTGTTTAATGTGTTTACTTCTCTACTCCTAAATGTTGTCAC
GGACAAAGAGCTCTCATGTACAGTCTTATGATTATCTTTCCGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002875846 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]12397e-134
NP_190339 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]12352e-133
ADA67984 RING-type E3 ubiquitin ligase [Brassica napus]12201e-131
NP_850668 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]11152e-119
XP_002864796 hypothetical protein ARALYDRAFT_496422 [Arabidopsis lyrata subsp. lyrata]10149e-108

Swiss-Prot top hits (Blast detail)Scoree value
Q9P2E8 E3 ubiquitin-protein ligase MARCH41409e-008
Q86YJ5 E3 ubiquitin-protein ligase MARCH91391e-007
Q3TZ87 E3 ubiquitin-protein ligase MARCH91391e-007
Q80TE3 E3 ubiquitin-protein ligase MARCH41381e-007
Q68FA7 E3 ubiquitin-protein ligase MARCH31362e-007

TrEMBL top hits (Blast detail)Scoree value
Q9SN83 Putative uncharacterized protein At3g4755012351e-133
D2KC47 RING-type E3 ubiquitin ligase12208e-132
A9CEI2 Uncharacterized protein At3g47550.211151e-119
Q9FJJ6 AT5g62460/K19B1_79904e-105
Q3E6V0 At3g475509762e-103

Arabidopsis top hits (Blast detail)Scoree value
AT3G47550.3 zinc finger (C3HC4-type RING finger) family protein12384e-136
AT3G47550.6 zinc finger (C3HC4-type RING finger) family protein12384e-136
AT3G47550.2 zinc finger (C3HC4-type RING finger) family protein11157e-122
AT5G62460.1 zinc finger (C3HC4-type RING finger) family protein9902e-107
AT3G47550.1 zinc finger (C3HC4-type RING finger) family protein9769e-106

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
64  57%
 
103  43%

Unigene MembersMember information