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Information for unigene UN21140
FASTA Sequence |
Unigene ID: UN21140 | Length: 1007 |
| SNP | GAACAAATATTGGAAATTTGTATTCCTCTTAATAGAGTCCAAACATCGTACTGTGCTATGATTCAATTTTATGTTTCTCAAAGGCA
AGAAATGCACTCTTAAAACCATGATCATAAACTCTCTAAGATTTTCAGAAACAAAAAGAAAGAAGAAAAAGATTCAGAATACAGTA
AATCACAATCCACAAAGATATAAAATCTGCGTGGATAGTTAAGTCATAAATGCAGAAACAGATCCTTGCTTCTTGAAGAAAAAGCT
CAGGTTCTCTTAGAGATGGCCATCACATTGAAGTTGAGCGTGTCCGGATTCTTATCAATAAACTTCTTCATTACCTTCGTCGCATC
CTTCAAGAGAGTAGCTGGAGAGGAAACACCATGTGAAATTGGTCCAGCTTTCCTTCCATCGAGTTCATAGAGCTCACCATCTACAC
ACGCTAAACAGATGAAATGTGTGTCCGCGTCGTCTGTAGCCGGTGTTTCACCAGCGGTAACCGCCACAGAATGCGCATCTTCTATT
TGACTGTCATTCTCAAGAAACCTTGCACGCTCCATGGGAGTCATATTGGCTGTGGATTTGAAGAATTTATCCAAGAAAGATCCCTC
AGAAAGCTTGATTTCAGAGGTAATGTTGCCAATAGCATGGAGAAGACCAATGGTTCCGCAAGCATTACCCACAGTTTGTTTCATGA
AGTAAACCTTATCACTATGCACCTTCTCCTTGATTTCCTTGTCTTGCTCGATCCTCTCTTCTTCACTCTTTTTGGTGATAGGGTAA
AGGAAGAGAACAGCAAGGACAGGCTTTGGAACCATCTCAAGAAGTTCGTCGTCTAATCCAAACACGTCATTGCACTCCGCCGCATC
TGGTTCAAGCCCAAGCCCCCAAAGAAACTGATTCATAACCTCTGGGTTAGCTTCAAGTGGAAGCCATCTCTTAGCAGAAGAACTCT
CCGTCGCCATCTTCGTGATCGTCTTTCTTTCTTTCTGATTTTGCACAACAACAAATTTTCC
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GenBank top hits (Blast detail) | Score | e value |
NP_193484 ubiquitin C-terminal hydrolase 3 [Arabidopsis thaliana] | 1098 | 1e-117 |
XP_002868057 hypothetical protein ARALYDRAFT_493125 [Arabidopsis lyrata subsp. lyrata] | 1085 | 4e-116 |
XP_002868056 hypothetical protein ARALYDRAFT_914962 [Arabidopsis lyrata subsp. lyrata] | 1026 | 3e-109 |
ABD65144 ubiquitin carboxyl-terminal hydrolase, putative [Brassica oleracea] | 1024 | 4e-109 |
ACU16876 unknown [Glycine max] | 920 | 5e-097 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q2TBG8 Ubiquitin carboxyl-terminal hydrolase isozyme L3 | 578 | 1e-058 |
P15374 Ubiquitin carboxyl-terminal hydrolase isozyme L3 | 575 | 2e-058 |
Q9JKB1 Ubiquitin carboxyl-terminal hydrolase isozyme L3 | 571 | 7e-058 |
Q06AB3 Ubiquitin carboxyl-terminal hydrolase isozyme L3 | 571 | 7e-058 |
Q91Y78 Ubiquitin carboxyl-terminal hydrolase isozyme L3 | 564 | 4e-057 |
TrEMBL top hits (Blast detail) | Score | e value |
Q8GWE1 Putative carboxyl-terminal proteinase | 1098 | 8e-118 |
Q2A9A0 Ubiquitin carboxyl-terminal hydrolase, putative | 1024 | 3e-109 |
C6T574 Putative uncharacterized protein (Fragment) | 920 | 4e-097 |
C6TJP0 Putative uncharacterized protein | 912 | 3e-096 |
B9GYN0 Predicted protein | 901 | 6e-095 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT4G17510.1 UCH3 (UBIQUITIN C-TERMINAL HYDROLASE 3); ubiquitin thiolesterase | 1099 | 4e-120 |
AT1G65650.1 UCH2; ubiquitin thiolesterase/ ubiquitin-specific protease | 157 | 6e-011 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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