Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN21142

FASTA Sequence
Unigene ID: UN21142Length: 920  SNP
GGAGCGTTTGACCAACGCGTACGAAAAGATTTGAAGGGCATCTCGGAAAAAAGCCTTTTATTTTATTTTACAAAAAGAGTTCGTAA
ACATTGTCGGAAATTTTATATCGACGAGACGAGAGACGAAGAAGCTTCTTTAGCTAGAAAAAAAAAAGAAAACCTAAATTCTCTGA
GAGATCGATCAAATCGGATAGCACGCAATAATGGCCAATAGTAATCTTCCACGGAGGATCATCAAGGAAACTCAACGTCTGCTTAG
TGAACCTGCTCCTGGGATAAGTGCGTCTCCATCTGAGGAAAATATGCGCTACTTCAATGTTATGATTCTTGGTCCTACCCAGTCTC
CTTATGAAGGAGGCGTTTTCAAGTTGGAGCTCTTTTTGCCTGAAGAATATCCGATGGCAGCTCCCAAGGTTAGGTTTCTCACCAAG
ATATACCATCCTAACATTGACAAGCTTGGAAGAATCTGCCTTGACATACTGAAAGACAAGTGGAGTCCTGCTCTACAAATAAGGAC
CGTGCTCTTGAGTATTCAAGCTCTTCTAAGTGCACCAAACCCAGATGATCCCCTCTCTGAGAACATAGCTAAGCACTGGAAAAGCA
ATGAAGCAGAAGCTGTGGAGACAGCTAAGGAGTGGACTCGTCTTTATGCAAGTGGCGCTTGATATAGAGTGCAAAAAGGAGAAAGT
TCCTTGTCATTTTAAATAACAATCTATATGGTGAAACACTCTTATCTCAAGGTTTTATCTAGAATCCTTTTTTTTCTAAAACAGGA
AAGAAAAAGATTTGTACTCTATGAATATGTATAACTTGGGTGGGTATTTAAGACTCGTTTGCCCATATTTGCAAACTAACTTATGA
GCTTTGTCTGTGTTGTTCTATTATCATTTGCTCACTGTAGACAATAAGATTTCACTTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564011 ubiquitin-conjugating enzyme E2 36 [Arabidopsis thaliana]7942e-082
XP_002887758 ubiquitin-conjugating enzyme 1 [Arabidopsis lyrata subsp. lyrata]7914e-082
ACU15235 unknown [Glycine max]7905e-082
BAJ93925 predicted protein [Hordeum vulgare subsp. vulgare]7897e-082
NP_565192 ubiquitin-conjugating enzyme E2 35 [Arabidopsis thaliana]7889e-082

Swiss-Prot top hits (Blast detail)Scoree value
Q9FZ48 Ubiquitin-conjugating enzyme E2 367948e-084
Q94A97 Ubiquitin-conjugating enzyme E2 357884e-083
Q9EQX9 Ubiquitin-conjugating enzyme E2 N6513e-067
Q0P5K3 Ubiquitin-conjugating enzyme E2 N6487e-067
P61088 Ubiquitin-conjugating enzyme E2 N6487e-067

TrEMBL top hits (Blast detail)Scoree value
B7FMQ3 Ubiquitin carrier protein7913e-082
C6SZW2 Ubiquitin carrier protein7913e-082
Q45W77 Ubiquitin carrier protein7913e-082
C6T129 Ubiquitin carrier protein7904e-082
B9SBK8 Ubiquitin carrier protein7886e-082

Arabidopsis top hits (Blast detail)Scoree value
AT1G16890.2 ubiquitin-conjugating enzyme, putative7956e-085
AT1G78870.2 UBC35 (UBIQUITIN-CONJUGATING ENZYME 35); protein binding / ubiquitin-protein ligase7893e-084
AT1G78870.1 UBC35 (UBIQUITIN-CONJUGATING ENZYME 35); protein binding / ubiquitin-protein ligase7777e-083
AT1G16890.1 ubiquitin-conjugating enzyme, putative6324e-066
AT1G78870.3 UBC35 (UBIQUITIN-CONJUGATING ENZYME 35); protein binding / ubiquitin-protein ligase5572e-057

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
74  36%
 
82  18%
 
115  45%

Unigene MembersMember information