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Information for unigene UN21158
| FASTA Sequence |
| Unigene ID: UN21158 | Length: 1282 |
| SNP | GGGCCGAAACGACTGTTTAGAGAGGAAGAGAGAAAGGGGAAGGAGAGAAGAGAGAGAGCAAAAGAAACTACACACAGTACTTTGTA
CCAAAATACTGTATCTCAAAAATGGGGAAATCTCAGATCTGGTTTGGTGTAGCGTTAGTGGCGTTGGTAGTGGTGTCAGCCGTAGC
AGACGACGTGGTTGTTGTGTTGACGGAAGAGAGCTTTGAGAAGGAGGTTGGTAAAGATAAAGGAGCTCTCGTCGAGTTTTATGCTC
CCTGGTGTGGGCACTGCAAGAAACTAGCTCCAGAGTATGAAAAGCTTGCTGCCAGCTTCAAGAAGGCCAAGTCTGTCTTGATTGCT
AAGGTCGATTGTGATGAACATAAGACTGTCTGCACTAAGTATGATGTTAGTGGATATCCCACCATTAAATGGTTTCCTAAAGGCTC
TCTTGAACCTCAAAAGTACGAGGGTGCACGCAATGCTGAAGCTTTGGCTGAATTTGTCAACAAGGAAGGAGGTACCAACGTCAAAT
TAGCTGCAGTTCCACAAAATGTAGTTGTGTTAACACCTGATAACTTCGATGCGATTGTGCTGGATCAGAACAAAGATGTCTTGGTC
GAGTTTTATGCCCCTTGGTGCGGCCACTGCAAGTCCCTCGCTCCTACATACGAAAAGGTAGCAACGGTGTTTAAGCAGGAAGAAGG
TGTAGTCATTGCCAACTTGGATGCTGATGCACACAAAAGCCTTGGCGAGAAGTATGGAGTAAGTGGATTCCCAACATTGAAATTCT
TCCCAAAGGACAACAAAGCCGGTCAAGATTATAACGGTGGAAGAGACTTAGATGACTTTGTAAGTTTCATCAATGAGAAAGTTGGT
ACCAGCAGAGACAGTAAAGGGCAGCTTACTTCAAAGGCTGGTATAGTTGAAAGCTTAGGTGCGTTGGTAAAGGAGCTAGTTGCAGC
GAGTGAAGATGAGAAGAAGGCAATCTTGTCTCGCATCGAAGAGGAAGCTAGTAACCTTAAGGGCTCCACAGCAAGGTATGGAAAGC
TTTACGCGTCACTCGCAAAGAAGTACATAGAAAAAGGTTCAGGCTATGCTACCAAAGAAGCTGAGCGGCTTGGACGCGTCCTTAGC
AAGTCGATAAGTCCGGTGAAAGCTGATGAATTCACTCTCAAGAGAAATATCCTAAACACGTTCGTTTCTTCTTCTTAGAAGCCAAA
AGATTGAAGAATAGGAGTCGTCGATAGACTTTATATATATTAAATAGTTATACATGGAAGGGGAATATATATGAGTTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002880305 hypothetical protein ARALYDRAFT_904222 [Arabidopsis lyrata subsp. lyrata] | 1689 | 5e-186 |
| NP_182269 protein disulfide-isomerase A6 [Arabidopsis thaliana] | 1680 | 6e-185 |
| NP_001031555 protein disulfide-isomerase A6 [Arabidopsis thaliana] | 1456 | 5e-159 |
| XP_002515309 protein disulfide isomerase, putative [Ricinus communis] | 1445 | 1e-157 |
| XP_002302750 predicted protein [Populus trichocarpa] | 1437 | 8e-157 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O22263 Probable protein disulfide-isomerase A6 | 1680 | 2e-186 |
| P38661 Probable protein disulfide-isomerase A6 | 1395 | 3e-153 |
| Q86IA3 Protein disulfide-isomerase 1 | 803 | 1e-084 |
| O13811 Protein disulfide-isomerase C17H9.14c | 706 | 2e-073 |
| Q10057 Putative protein disulfide-isomerase C1F5.02 | 288 | 6e-025 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q546R3 PDI-like protein | 1680 | 4e-185 |
| Q2V400 Putative uncharacterized protein At2g47470.3 | 1456 | 4e-159 |
| B9RNH0 Protein disulfide isomerase, putative | 1445 | 7e-158 |
| B9GSG3 Predicted protein | 1437 | 6e-157 |
| B9I9L2 Predicted protein | 1427 | 8e-156 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G47470.1 UNE5 (UNFERTILIZED EMBRYO SAC 5); protein disulfide isomerase | 1681 | 2e-187 |
| AT2G47470.3 UNE5 (UNFERTILIZED EMBRYO SAC 5); protein disulfide isomerase | 1456 | 2e-161 |
| AT2G47470.4 UNE5 (UNFERTILIZED EMBRYO SAC 5); protein disulfide isomerase | 1414 | 1e-156 |
| AT2G47470.2 UNE5 (UNFERTILIZED EMBRYO SAC 5); protein disulfide isomerase | 1279 | 7e-141 |
| AT2G32920.1 ATPDIL2-3 (PDI-LIKE 2-3); protein disulfide isomerase | 265 | 2e-023 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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