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Information for unigene UN21179
| FASTA Sequence |
| Unigene ID: UN21179 | Length: 1250 |
| SNP | GAAGAGAGAGAAAAACGGAAACAAGAATGGCCACAGACTTCAAATCCTTACCAGTCATAGACATCTCTCCTCTACTGCTCAAGTGT
GATGATCCCAACATGGCAGAGGATCCTGGAGTCATTGAGGTTGTCCAACAACTGGACAGAGCTTGTCGGGACGCTGGATTCTTCTA
CGTGATAGGACATGGAGTCTCGGAGGATCTTATCAAGAAAGTCAGAGAGATCACGCGTGAGTTCTTCATGCTTCCTTACGAAGATA
AACTTAAGATCAAGATGACTCCTGCTGCTGGATACAGAGGATATCAGAGAATTGGAGAAAATGTAACCAAGGGAAAACCAGATATT
CACGAAGCCATTGATTGTTACAGAGAGTTTAAGCAAGGGAAGTATGGTAATATAGGCAAAGCCATGGAAGGGCCAAACCAGTGGCC
AGAGAATCCTCATGAGTTCAAGGAGTTGATGGAGGAGTATCTAAGGCTCTGTACAGATCTTTCAAGAAACATATTGAGGGGAATTG
CATTAGCTCTTGGAGGATCACCTTATGAGTTTGAAGGAAAGATTGCTGGAGAGCCTTTTTGGGTGATGCGTCTTATTGGCTATCCT
GGTGCTCCCTTCACCAATGGCAAGCTCGAAAACGAAGTTGGATGTGGAGCTCACACTGACTATGGCTTGTTAACTCTTGTAAATCA
AGATGATGACAAAACTGCTCTCCAGGTGAGAAATTTGGGAGGTGATTGGATATCAGCCATTCCCATCCCTGGATCATTTGTGTGCA
ACATCGGCGACATGTTAAAGATACTTTCAAATGGAGTATATGAATCCACACTTCATAGAGTGATCAATAACTCTCCTCTATACCGT
GTCTGCGTTGCATTCTTCTACGAGACTAATTTTGACGCGGTGGTGGAGCCATTGGATGTTTGTAAAAATAAGTACCCTGCAGTGAG
AGGAGAATCACAAGTTTTCAAAAGGGCTGTCTACGGAGAGCATCTGGTGAGCAAAGTCCAAACCAACTTTGCTATGTAATGAAACA
TAGATCTCTCTCCCTCAATCATCAGTACTTCACCTTCAGGTTTGGCTTGTAAACTATAATAAGGGCTTCCTCACGTCTGTATTATT
AATCAAAATAAAAGGTTTTGTTCAAATTCGTTTGAGCATACCCAGTCGACTGAGTAAGTCAACTAAATGAATTATGTGGGAGCCTC
TTTCTTGTCTTTGATTACCTTCTATTCTATCCTTGACTGCTTGGAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002877735 hypothetical protein ARALYDRAFT_485377 [Arabidopsis lyrata subsp. lyrata] | 1607 | 2e-176 |
| NP_566930 2-oxoglutarate-Fe(II)-dependent oxygenase domain-containing protein [Arabidopsis thaliana] | 1603 | 5e-176 |
| AAM63621 flavonol synthase-like protein [Arabidopsis thaliana] | 1600 | 1e-175 |
| NP_190532 2-oxoglutarate-Fe(II)-dependent oxygenase domain-containing protein [Arabidopsis thaliana] | 1390 | 2e-151 |
| NP_190531 2-oxoglutarate-Fe(II)-dependent oxygenase domain-containing protein [Arabidopsis thaliana] | 1356 | 2e-147 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P31238 1-aminocyclopropane-1-carboxylate oxidase 1 | 210 | 7e-016 |
| Q39705 1-aminocyclopropane-1-carboxylate oxidase 2 | 208 | 1e-015 |
| Q09052 1-aminocyclopropane-1-carboxylate oxidase | 206 | 2e-015 |
| Q76NT9 1-aminocyclopropane-1-carboxylate oxidase | 206 | 2e-015 |
| A6BM06 1-aminocyclopropane-1-carboxylate oxidase | 206 | 2e-015 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q84MB6 AT3G50210 protein | 1603 | 3e-176 |
| Q8LCJ7 Flavonol synthase-like protein | 1600 | 7e-176 |
| Q8H113 Putative uncharacterized protein At3g49620 | 1356 | 1e-147 |
| Q8RXJ6 Putative uncharacterized protein At3g49620 (Fragment) | 1356 | 1e-147 |
| Q9SCJ7 Putative uncharacterized protein T9C5.210 | 1356 | 1e-147 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G50210.1 2-oxoacid-dependent oxidase, putative | 1604 | 1e-178 |
| AT3G50210.3 2-oxoacid-dependent oxidase, putative | 1604 | 1e-178 |
| AT3G49620.1 DIN11 (DARK INDUCIBLE 11); iron ion binding / oxidoreductase | 1356 | 8e-150 |
| AT3G49630.1 2-oxoacid-dependent oxidase, putative | 1318 | 2e-145 |
| AT3G50210.2 2-oxoacid-dependent oxidase, putative | 1229 | 4e-135 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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