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Information for unigene UN21196

FASTA Sequence
Unigene ID: UN21196Length: 2041 SSR 
GGATAGCGAGCCTAGCGGAGCAACTTGCTTGCTTAATCGCAAACCGGCGAAGGAAGCGAACGAGCGAGAATCTTTGTTTCGTACTA
TCGGTCGACTACTCCTGATTATCGCCGACAATCCCTTAGGTAGCAAATGAAGAAGAAGAATCCTAGTGTATTCTTGGATGTCTCCA
TTGGTGGGGATCCCCTTGAACGTATCGTCATTGAGCTTTTTGCTGATGTTGTCCCCAAGACAGCCGAGAACTTTCGTGCTCTCTGC
ACAGGTGAGGCAGGCCTTGGAAAGACCACTGGCAAGCCTCTACATTTCAGAGGATCATCTTTCCATCGAGTCATTAAAGGTTTCAT
GGCTCAAGGTGGTGATTTTTCTTATTGGAAATGGCACCGGCGGGGATAGCATCTATGGTGGGAAGTTTTCAGATGAGAATTTTGAA
CTGGACCATGAAGGAGGTGGATTCCTTTCGATGGCAAATTGTGGCCCAAACACCAACGGGTCGCAGTTTTTTATCCTTTTCAAACG
CCAGCCACATCTCGATGGGAAGCATGTTGTATTTGGGAAAGTCGTGAAGGGAATGGAATTTGTCAAGAAAATGGAGCTTGTAGGGA
CGAGTGATGGTAAACCAACCAGCAATGTCAAAATAATTGACTGTGGCGAAATGTCTCAGTTAAAAGCTCAGGATGCTGCTGAAAAA
GATAGAGGGAAATTGAAAAAATCTAGCAGAGGCTCTCCTTCGGGTGACATATCTGATCGTGAAGCTAGGGGAACACGCAAGAAAGA
CACTCGGGAGAAGTCAAGCGAAAAAGAAGATACTCGTCTTCGTCAGATTCATATAGCTCAAGTTCTGAATCAGATTCTGAATCAGA
AACAGATTCATCCTCTTATGAGTCTAGTTCTTCCAGTGATGGGAAGCGTAGGAAGAGGAGGTCAACAAAGAGACACAAAGGCCGAC
GCGTGGAAAGAAAGATCAAAGGACGAAAGGGGAAAAGGAATGGTCGAGGAGACAGACCACCTCAGCGCAGAAACAAGGATAGTTCA
AGTGACACCGAGAGTAGCAATTCTGATGACGAGAGAATGGGCCACAAAAAGTCAAAGAAAGCTAAAGATGGTGTGCCTGTAAGGAA
TGCTGCCGATTCTAGTCCTGTGAAGAAGAATTTTTCGGGGGAGGAACCAGATTCTCTTCTGAATGAAAATGGAAAGGCCACCAAAG
TTGATAATCAACGTGCTGACTCAGTGAAATCAAGGAGTATGAGCCCAGTTGTTAGGAGAAATCAAAACAGTAAGAGCAAAAGTCCC
AGTAGGAGCCCTGTGAGAGATGTTGGAAATAGGAGCAGAAGTCCTGGCTCTGCGAGGAAATCTTCAAGAAGCCCATCTCCAAATGG
AGAGCCCAAGCGCATCCGAAAGGGGCGTGGCTTCACAGAACGTTATGCATTTGCTCGGAAGTACCGTACACCATCTCCTGAGCGTT
CCCCTCCTCGGCACTGGCCTAACAGAAGAAGCTTTCAGGACAGGAACACAGACAGGTATCCTAGCAACAGGAGTTACTCCGAACGC
TCGCCTAGACGACGCTTTAGGAGCCCACCCAGGAGAAGGAGCCCTCCAAGGTACAACCGGAGAAGAAGAAGCATTTCACGGAGTCC
AGATGGGGAGCGCAGACGTTTCAGAGAGAGAAGCATGAGCCAAAGTCCAAGTCGTCATTGTAGCCCTAGCCGTAGCCCCAGAAAGA
GGCAGCCAATTAGCGAAGACCTTAAATCACGGCTGGGGCCACAAAGATCTCCCATCATAGGAGGAGCAGAATCGCTCAGCGCTTCT
CCCTCAACTTCCCCATCGGGACAGAGAGGTTTGGTTAGCTATGCAGATTGATCTCACTCATCCATCGATTTGCATGCTGCTGCTGC
TGCTGCTGATGAGTTTTGTTGCCTTGTTTTAATGCAAAGGAAAAATCTATAATGATCAGTTTGTTGGTCGGATATATCTTGTTACT
CGTCACCTTTGCTTGTTGTTTGCTTTACAGATTCCTGTCGAGTAATTTAATTAAATTCAGACT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAH57223 AT3G63400 [Arabidopsis thaliana]11064e-118
NP_191899 cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana]11011e-117
AAS75310 multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana]10402e-110
XP_002876720 hypothetical protein ARALYDRAFT_324764 [Arabidopsis lyrata subsp. lyrata]8502e-088
NP_850740 cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana]5957e-059

Swiss-Prot top hits (Blast detail)Scoree value
P34790 Peptidyl-prolyl cis-trans isomerase CYP18-33337e-030
Q9SKQ0 Peptidyl-prolyl cis-trans isomerase CYP19-23337e-030
P0C1I2 Peptidyl-prolyl cis-trans isomerase E3311e-029
Q38867 Peptidyl-prolyl cis-trans isomerase CYP19-33264e-029
P0C1I7 Peptidyl-prolyl cis-trans isomerase cyp53247e-029

TrEMBL top hits (Blast detail)Scoree value
C0Z3E4 AT3G63400 protein11063e-118
Q9LY75 Cyclophylin-like protein11011e-117
Q6Q150 Multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase10401e-110
Q3EAF2 Putative uncharacterized protein At3g63400.25955e-059
B9S4P8 Cyclophilin, putative4826e-046

Arabidopsis top hits (Blast detail)Scoree value
AT3G63400.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein11024e-120
AT3G63400.2 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein5952e-061
AT2G21130.1 peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP2) / rotamase3336e-031
AT4G38740.1 ROC1 (ROTAMASE CYP 1); peptidyl-prolyl cis-trans isomerase3336e-031
AT3G56070.1 ROC2 (ROTAMASE CYCLOPHILIN 2); cyclosporin A binding / peptidyl-prolyl cis-trans isomerase3264e-030

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  33%
 
61  17%
 
122  33%
 
91  17%

Unigene MembersMember information