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Information for unigene UN21207

FASTA Sequence
Unigene ID: UN21207Length: 1121 SSRSNP
GGGTCTCTGAGAAGAGTGTAAAAAGGAAGCGCCTTTTTTTTTTGCCTCTGTCTTAATTTCACAGAGGAGACAAAACAAAAGCGATG
TCGCAACTCTTATCTTCTCCTCTGATGGCTGCAAGTTACAATCCTTTTGCTAGCCCTCGCTTTCTCTCTTCGTCTTCTTCAGTACT
CGTCCCCGGCGGCGGCGGCGGTCTCGCCGTGAAACGACATGGACTAGCTTCGAAACCGGTGAGGAAGTTGAATCTCTCGGTGAAGT
CCCGGCAGACGGATTACTTCGAGAAGCAGAGGTTCGGTGACTCGTCTTCTTCTTCTTCACAGAACGGTGAAGGAGGACCTGCTAGG
TTTTACGTGGGTCATTCGATATACAAAGGGAAAGCTGCGTTAACAGTGGAGCCAAGAGCACCGGAGTTTGTGTCTTTAGACTCTGG
AGCTTTCAAGTTGTCCAAAGACGGGTTTCTACTGCTTCAGTTTGCTCCTGCCGCTGGTGTAAGGCAATACGATTGGAGCAAGAAAC
AGGTGTTCTCATTGTCGGTTTCAGAGATTGGAACTCTAGTTAGCCTAGGCCCAAGGGAGTCTTGTGAGTTCTTCCATGATCCTAAC
AAGGGGAAAAGTGATGAAGGAAAGGTGAGGAAAGTGTTGAAAGTTGAGCCTCTCCCTGATGGTTCTGGCCACTTCTTCAACCTAAG
TGTTCAAAACAAGCTGTTGAATGTTGATGAGAGCATTTACATACCAATCACTAGAGCAGAGTTTACTGTTCTGGTCTCTGCTTTCA
ATTTCGTCTTGCCTTACCTTATAGGCTGGCACGCATTTGCGAACTCCATCAAACCAGAAGAGACAAACCGTACGAACAACGCTTCA
CCTAACTATGGAGGAGACTATGAATGGAATAGATAGATGAATTTTCTAAGGGCCATAGGAGAATAATCTTATCCTTGTTTGCGGAT
AGTGTTGTTGAAGAATGTTCTTTGTTCGTAGCTAGCAGAATAGACTAAAAGTAGTGCTTTGCTTTTTTGACCAAACGTGGAAATGA
AAAAACAAGATCTTTTGTGTTACGCTCCGTTGTATTGTATCTCAAAACATCAGTTGATTTGTCTTGTCTTATTTTAGCTGTTTTTG
ATA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892804 ATWHY1/PTAC1 [Arabidopsis lyrata subsp. lyrata]11322e-121
NP_172893 ssDNA-binding transcriptional regulator [Arabidopsis thaliana]11204e-120
XP_002875143 ATWHY3/PTAC11 [Arabidopsis lyrata subsp. lyrata]10245e-109
NP_001077872 ssDNA-binding transcriptional regulator [Arabidopsis thaliana]10237e-109
NP_178377 ssDNA-binding transcriptional regulator [Arabidopsis thaliana]10202e-108

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9M9S3 F14L17.18 protein11203e-120
A8MR64 Uncharacterized protein At2g02740.210235e-109
Q66GR6 At2g0274010201e-108
Q0WLJ4 Putative uncharacterized protein At2g0274010172e-108
B9S2A9 Putative uncharacterized protein8622e-090

Arabidopsis top hits (Blast detail)Scoree value
AT1G14410.1 WHY1 (WHIRLY 1); DNA binding / telomeric DNA binding11229e-123
AT2G02740.2 WHY3 (WHIRLY 3); DNA binding10332e-112
AT2G02740.1 WHY3 (WHIRLY 3); DNA binding10252e-111
AT1G71260.1 ATWHY2 (A. THALIANA WHIRLY 2); DNA binding4426e-044

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  33%
 
123  25%
 
112  17%
 
83  25%

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