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Information for unigene UN21215

FASTA Sequence
Unigene ID: UN21215Length: 662  SNP
GGGAGGAGCCGCATTTTAGAGGTGATTTCTCTTCGTCTAGGGTTTCACCAAGCCGTTGTCTTTCGTCGCATTTCCTCAACGCAAAC
CATGGTTCTCCAAAACGACATCGATCTGCTCAACCCTCCAGCTGAGCTCGAGAAGAGAAAGCACAAGCTTAAGCGTCTCGTGCAAT
CTCCTAACTCTTTCTTCATGGACGTTAAGTGCCAGGGATGCTTTAACATAACGACGGTGTTCAGCCACTCTCAAACAGTTGTAGTG
TGTGGTAACTGTCAGACGGTTCTGTGCCAGCCCACTGGTGGTAAAGCCAGGCTCACTGAGGGATGCTCTTTCAGGAAGAAGTGAGA
GAATGATATTTCTCACGTTAATCATCTTTTCACAAATGTTGCTGTGAGAAAGAAGTCGGATCTTTTTTCAGTTTGCTTTAGTACTT
GTTATTGTGTTTATGACAGTGTTTCTTTTTTTTTGATTATGAGAAGATTTTGAAACCATCATCAAACTACTAGTTCGGTTCCTCTA
CTTTTTTATTTATAAATCATTTCTCGAATCGCATCAACCGTCTTGTTTATTGTCTACATGTCTCTCGTTTGTCACTCGTTGAATTA
AACACTAAACATCCATTATTTAATCTAATGGAAGCTTTCTAGGTTCTATATTGACATATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABL97986 ribosomal protein S27 [Brassica rapa]4516e-043
ACJ86187 unknown [Medicago truncatula]4516e-043
BAJ34536 unnamed protein product [Thellungiella halophila]4507e-043
ACJ84132 unknown [Medicago truncatula]4481e-042
ACU13729 unknown [Glycine max]4481e-042

Swiss-Prot top hits (Blast detail)Scoree value
Q9M2F1 40S ribosomal protein S27-24442e-043
O64650 40S ribosomal protein S27-14362e-042
Q8L953 40S ribosomal protein S27-34352e-042
Q96564 40S ribosomal protein S274218e-041
P47903 40S ribosomal protein S273842e-036

TrEMBL top hits (Blast detail)Scoree value
A1YMY0 Ribosomal protein S274514e-043
B7FN54 Ribosomal protein S274514e-043
B7FHA3 Ribosomal protein S274489e-043
C6SWV6 Ribosomal protein S274489e-043
A9P8F6 Ribosomal protein S274461e-042

Arabidopsis top hits (Blast detail)Scoree value
AT3G61110.1 ARS27A (ARABIDOPSIS RIBOSOMAL PROTEIN S27); structural constituent of ribosome4442e-044
AT2G45710.1 40S ribosomal protein S27 (RPS27A)4371e-043
AT5G47930.1 40S ribosomal protein S27 (RPS27D)4361e-043
AT3G61111.1 structural constituent of ribosome3842e-037

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
69  60%
 
94  27%
 
122  13%

Unigene MembersMember information