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Information for unigene UN21223

FASTA Sequence
Unigene ID: UN21223Length: 1535  SNP
GATGTTTTAACATCATTGGTTGATTTAGAAACTGCCAAACCTGTTTGAGTATTGAGCATATAAGTTTTGTGTTATTAAATTGCTAC
AGAACAAAACACAAAAAGGCTTTTTATAAACCTTTCAAATACCACAATGTGTTGTCTCTGTCAATCAAAAGACAAAGATCTTTGTA
TGTTTTCTTAGAGCATTCTATCCTGAAGATCACTGAATATACCAGATGCCAATGACCCCAGCTTCTTGGTCGTTTCTTCCGCTATG
TTAACAAGGGACGACACATCTTGCTGCGCCTGGAAAGAAATTCGGTTGATGAGATCGCTTGCAGTGATATCAACGTTGGAATCATC
TTGTCCATGACCAAAAAGATCAGCACTTGAAATAGCTGCTGAGCCCGAGAACTTCTGAAGAGTAGCTTTTGATTCAAGATCAGCAT
CTCTGTTCTGATTCCCGTAAAACTGTGCAGATGAAATCGATTTCGCGTTTGAAAACTTCTTTCTCGCTTCATCAGTTTCTTCAACT
TGAACTTTTGACGAGCTTGAGGTTGGTTTCTTGGAGAAAGAAGTGTCCATTCCATACTCATTAAAGAAATTCGATGACTTTGGTGG
AGCGACGTGACTAAGCACTCGTGTGCCACTTTGCCCACCGGACTGCTCCTCATCAAAGTACTCAAACCGAGAGGCAAACGATGATC
CAGCTGATGATGATGATGTGGTTTTAGTCGAAGAAGCAGCAGGAATCACAGGTACAGGCTCTTCAGGCTTCTGATCATAAAGGTTC
TCTTTCGGCTTAGTGGTAAGCTTACGAGCACCAAGACCACCAGTCTTCCCAGTCTTTCTAGCAACAAGAGGTTTCTTAAAGGTACT
AGCCACAGCTCCCTGAGAAGCCTTTGGTGGAGAAGAGACAGCAACAGTTGCCTCTTGCTTAACAACCAAAGAAGTCTCTTTTGCTG
GAGGCTCCACCGGCTGAGAAGTAGCAGCAACAGATGAAGAAGGCAAAGTAGCTTCTTCTTCAGCCATTGCTTTAGCAACTTCCTTA
GCGAGAGTTTGCTTATACAAATCAGCAGCTCTCGAAGTGTACTTAGCATCGATTCTGCCGCCTTCGTTCCAGCCATGCTGCTTGAA
AAACACCTGAGCTCGGTTGTTTCCCCCAAACATCATTGTTCTTAGCTGCTCTGGACTCCACGAATCCAAGTTCGTCGACCTGACGA
AGCTGATGTGGACACCGAGGTTTTGATGAACAGCTGAGCAATCGATGCAGAGAAAGACGCCGTAAGTAACCGAAGCCCAGGTTGGA
TTCTTCGCACTACAATCGAAGCACACCTTGTTCTCCGATTTGGCTTTGAGTTTTCTGAAAACAACATTCTTATCGGCGTGATTCTC
AGTCGCCATCGTTATGGAGTTATGCAGGAGATTTTACAGATCGAGAGAAAGAAGAAATCTGGAGTTCTGAACAACTTGTGACGGAC
GACAGATCAAAACTCTCTCTTCTTCAAAGCTGCTGAGAGATTATTTTTTTCTTCCGTGTTTTCTTCGTTTCGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002863391 ARF-GAP domain 8 [Arabidopsis lyrata subsp. lyrata]17032e-187
NP_199487 putative ADP-ribosylation factor GTPase-activating protein AGD9 [Arabidopsis thaliana]16753e-184
CAA17132 putative protein [Arabidopsis thaliana]15444e-169
NP_567543 putative ADP-ribosylation factor GTPase-activating protein AGD8 [Arabidopsis thaliana]15373e-168
BAD43015 unknown protein [Arabidopsis thaliana]15338e-168

Swiss-Prot top hits (Blast detail)Scoree value
Q9FIQ0 Probable ADP-ribosylation factor GTPase-activating protein AGD916751e-185
Q8H100 Probable ADP-ribosylation factor GTPase-activating protein AGD815371e-169
O82171 ADP-ribosylation factor GTPase-activating protein AGD1012198e-133
Q5RAT7 ADP-ribosylation factor GTPase-activating protein 23684e-034
Q8N6H7 ADP-ribosylation factor GTPase-activating protein 23667e-034

TrEMBL top hits (Blast detail)Scoree value
B9DG60 AT4G17890 protein13947e-152
B9SNV8 Arf gtpase-activating protein, putative13671e-148
B9N2M5 Predicted protein13373e-145
B9MU26 Predicted protein13338e-145
C5WRB2 Putative uncharacterized protein Sb01g02825012324e-133

Arabidopsis top hits (Blast detail)Scoree value
AT5G46750.1 AGD9 (ARF-GAP DOMAIN 9); ARF GTPase activator/ DNA binding / zinc ion binding16768e-187
AT4G17890.1 AGD8 (ARF-GAP DOMAIN 8); ARF GTPase activator/ DNA binding / zinc ion binding15388e-171
AT4G17890.2 AGD8 (ARF-GAP DOMAIN 8); ARF GTPase activator/ DNA binding / zinc ion binding13944e-154
AT2G35210.1 RPA (ROOT AND POLLEN ARFGAP); ARF GTPase activator/ DNA binding / zinc ion binding12197e-134
AT2G35210.2 RPA (ROOT AND POLLEN ARFGAP); ARF GTPase activator/ DNA binding / zinc ion binding10172e-110

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
85  38%
 
103  23%
 
123  23%
 
62  15%

Unigene MembersMember information