Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN21224

FASTA Sequence
Unigene ID: UN21224Length: 576  SNP
AATGTAAATGCGAAGGTTATAACTAAAAAAATCTCTTGAGAATTGCAGGAATGTCAAAAAGATAGCCATCGGGTACAAACTAAGAA
AAAACAACATAGAGGTTCCAAAGGGTTTAACACAAAATGAAAAAGACGACAAAAACAGAATGCGGACAAGTATTACTCGAAAAGAC
TGAAACCCATGTCATCATCGGATTCTTCCTTCTCTTCTTTCTTCTCTTCCTTCTTGGCCTCAGCAGCAGGAGCAGCACCTCCTCCA
CCACCAGCAGATGGAGCAGAGGCCATGGCAACACCACCACCGCTTGGAACAGAAGCCAGCTTCTCCCTACCAGCAGCGATCAATTC
GCACAAGTCTTTCCCATTCACTTCCTTCAACAAAAGCTCAATCTGAGAGTCTTCAGATTCACAACCAACAGATCCGAGGATACTCT
TGACATCGGCACTGGTTGGGGAAGCTTTTCCGCTCAATGCGGCGAGCAGGTACGCGGCGACAACCTTCATTTTAGCAGAAGTTTGA
TGGAGATCTCGAAGGAGGAGGAAAGCTCACGAGTGTTTTTGAAGACGGCGATCCCCCGGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAM65044 60S acidic ribosomal protein P2 [Arabidopsis thaliana]4783e-046
NP_180339 60S acidic ribosomal protein P2-2 [Arabidopsis thaliana]4756e-046
NP_180340 60S acidic ribosomal protein P2-1 [Arabidopsis thaliana]4712e-045
XP_002880973 predicted protein [Arabidopsis lyrata subsp. lyrata]4578e-044
XP_002880972 predicted protein [Arabidopsis lyrata subsp. lyrata]4433e-042

Swiss-Prot top hits (Blast detail)Scoree value
Q9SLF7 60S acidic ribosomal protein P2-24753e-047
P51407 60S acidic ribosomal protein P2-14711e-046
Q9LXM8 60S acidic ribosomal protein P2-43832e-036
O24415 60S acidic ribosomal protein P2B3804e-036
P46252 60S acidic ribosomal protein P2A3697e-035

TrEMBL top hits (Blast detail)Scoree value
B9DGN3 AT2G27710 protein4755e-046
A9PCM7 Predicted protein4031e-037
B9SSU4 60S acidic ribosomal protein P2, putative4021e-037
A5AGQ2 Putative uncharacterized protein3913e-036
Q7XYD5 Acidic ribosomal protein (Fragment)3877e-036

Arabidopsis top hits (Blast detail)Scoree value
AT2G27710.1 60S acidic ribosomal protein P2 (RPP2B)4763e-048
AT2G27710.2 60S acidic ribosomal protein P2 (RPP2B)4763e-048
AT2G27710.3 60S acidic ribosomal protein P2 (RPP2B)4763e-048
AT2G27720.1 60S acidic ribosomal protein P2 (RPP2A)4728e-048
AT3G44590.2 60S acidic ribosomal protein P2 (RPP2D)3956e-039

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
84  27%
 
67  47%
 
94  27%

Unigene MembersMember information