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Information for unigene UN21257

FASTA Sequence
Unigene ID: UN21257Length: 643 SSRSNP
AAACTTATTAAGTTATACTCGGAGATTCCATACAGAGGCTAAACTATAACAATGTCTTCACCTTGGAGACTCTATACGATCAGAGT
TAAGATTTATTGAAGAACGTATCTGTTGTTTCAAATGGACAGACAATATCCGATTATAACAAAGTTATTACACCAGAGTTTTCATA
TCTCTCTCCCCCCTCTCTCTCTCTCTGGTCTCTAAACTCATTCGCCCTGAGCAGCTCCTCCATCTTCACCGGATGGAGCACATGGA
GACTTCCTGTAACGCGTCTGCTGCTGCGTTGGCTGTAACTTGGGACGAAGAGCTTCTAAGGGTCCCTTTGGCTTAGCAACACCTTG
CTTTCCAAGAGCCCAGTCAGCTGAGTCAAAGTATGCTCGTTCATGATCCTTGGAAATGAGAGGTGGTTTCTTTGGCATGAGTCCTC
CATACTTGTTCTTTACAGCATCTCCTCTTGCTGTGATGATGGCATTGAATTATCTGCGTCATTTGTGAGGTTCCCTTGCTCTTTCA
CATCCTCTACGCTTGACATTTCTGATGATGTCTCCTCAACGCCCACCAAAATCAGGGAGGAAGGATTTGCGATTGGCTCCTATCTC
TGTGTTGGTTGCGACGTTTCTTTTGTTGTTGATGTTGTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002866597 hypothetical protein ARALYDRAFT_496610 [Arabidopsis lyrata subsp. lyrata]4004e-037
NP_568985 cAMP-regulated phosphoprotein 19-related protein [Arabidopsis thaliana]3961e-036
XP_002270339 PREDICTED: hypothetical protein [Vitis vinifera]3682e-033
ACU14268 unknown [Glycine max]3673e-033
XP_002330940 predicted protein [Populus trichocarpa]3655e-033

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q93Z49 AT5g64130/MHJ24_113969e-037
C6SYE5 Putative uncharacterized protein3672e-033
A9PB82 Predicted protein3653e-033
B7FN21 Putative uncharacterized protein3645e-033
A9PDR8 Predicted protein3601e-032

Arabidopsis top hits (Blast detail)Scoree value
AT5G64130.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lg106-like (InterPro:IPR012482); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G69510.3); Has 93 Blast hits to 93 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3966e-039
AT5G64130.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lg106-like (InterPro:IPR012482); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G69510.3); Has 91 Blast hits to 91 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3089e-029
AT5G64130.2 unknown protein3043e-028
AT1G69510.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lg106-like (InterPro:IPR012482); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64130.1); Has 92 Blast hits to 92 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2667e-024
AT1G69510.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lg106-like (InterPro:IPR012482); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64130.1); Has 92 Blast hits to 92 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2667e-024

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
191  17%
 
112  33%
 
83  50%

Unigene MembersMember information