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Information for unigene UN21268
| FASTA Sequence |
| Unigene ID: UN21268 | Length: 1043 |
SSR | | TTTTTTTTCTCAATCAATCGAGAAGAAAGTTAGGGTTCGTTATCAGCAATGATTCCAGCGAAGAGTTCCGATGATTTCAGTTGGGA
GAAAGATTTGTCAGAGGATCTTCGAATGTATAATGAAGAGTGGGATAAGAGCGGGGTTAGGAGAAACGAAACGATGATCCCTCCAT
TTTTCTCTCTCTCTCTCTTCTTGATTCAATTTTGATTATTTTGTTGTTGTGTGCTCTCTTCGTTTGTCAGGGTTTCGATATCGACT
TCTCGAAACTCCGTCACAAACTCGACACAGGAGCTGTGGATCTCAACGACGATAACCTGGTTCTTGACCCTGATGATACCAACTTA
GCTCTGCTCACCAGGTTGACGCACTTGGCTATCACGCACCACAAATACGAGACGGTTAGTTAGTAAAACGATGACTTTTTTACCCC
TTTGACAGATTGAATATCTCTCTCTCTCTCTTTGCTTGTGGTCTAGGGTATAAGAAGCCTTGAGTTTGTCAGGGTCTTGAAAGCGA
ACTACCACCCATCCGCTGGAGTCACCTACTACATCACATTCGAAGCCCGATGATGGTAATCGGACTAAACAGTATCAGGCAGTGGT
TCGCTACTTGCCTGTGAATACTCAAGTTATCTCTTGCTGGCCTAAACCCTCTTGAATGTTTTCCACCACTGCCGCTCTCTATGAAT
GGGAAGAATAAAAAGTCGGTTACTGTTATCTTGTTCCTTTAACTTCTATATGTCAGACTTTTAGTTGTTTCACTATGGCTTTTGCC
AAGTGTTGTTGCTACAAAAGCCACTACTGTTTACATCAGCTACTTATGGAATATGTTGTTGTTTCGTGTTTTTGTCTACTCTTTTT
TCCTGCTCATAGCTTAGGTTCTTAAAAGAGTAAATAGTAAAATGATTAAGATGTGGAGGAGGCAATGAGACCTGGTGGTGCTGGAG
CCAGAGAGAATGGTGTGGAGATGATTATTCTCGCACAAAGTTGCTTGTTGTACGCTCTTGAACACTTCCAAAATCAACCATGCATA
TTTTCCCAACG
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_196123 cystatin/monellin-related protein [Arabidopsis thaliana] | 148 | 2e-007 |
| NP_196125 cystatin/monellin-related protein [Arabidopsis thaliana] | 147 | 2e-007 |
| Swiss-Prot top hits | Score | e value |
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| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q9FF70 Genomic DNA, chromosome 5, P1 clone:MUG13 | 148 | 1e-007 |
| Q9FF68 Genomic DNA, chromosome 5, P1 clone:MUG13 | 147 | 2e-007 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G05040.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G05060.1); Has 40 Blast hits to 40 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 148 | 7e-010 |
| AT5G05060.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G05040.1); Has 40 Blast hits to 40 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 147 | 9e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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