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Information for unigene UN21287

FASTA Sequence
Unigene ID: UN21287Length: 1167 SSRSNP
GATTGGTAATATAGTTTCATGGCTATGATTGTCTTTCAAAAGTTCACTTAGTCAAGAAAAAATTCCAAACGTTCAGAGAACGACAC
TGGTACTAAAGGTATTGCAGAAAAGGAAAACTAAAGAAATAGCTGAACAACCACTCTTGCAACTATAGTAACTAAAGAATTTACCT
CAACACAATGGTAATATGTAATTATATTCATACGAGATGCACATACTTCAAACCTTTTACCCGAAAGGAAAAATTACCACCATCCT
CTCTTCCTTCTCTTTTTACTTGTTTCCCCTAAAGTAGAGGTAAATTTTCTGAAGAACCCATAGACTCAGAAGTGACTCCAAGCAGA
AGAGACCAAAGCCGATAAAGTAGAAGATCCCGGCTAATACACTGTCTGAGATGACATCAATTGCTGCAAGCACACCCGTTAATGAT
TTTCCATGGAAAAAGATCGGTGGGGCAATGGCAGCAACGATGCAGAAGCCAATATGAATCAAGTAGGTGAAGAAAAACCAACCAAA
CTTCAAAGCGCTGTCAGTCCTCATGGCTCGGTAGAGAGGCCTGTACCATACAACATAAGAAAGTGGACATCCCATCAGCGCATATA
TCGTGGCAAGGAAAAAGATCTTTACACCTCCGCCTTTAATCCAGCAGACCATGGTTGCAATCACATTGAATACCAGACACAAAACG
ATACCTAACCAACTAGCAAAAGCCAGATACTGCAGCTTCTGAGCATGAACTGGTATCTCATTAGCAATGTCATGGTGTATGATTGG
AAAAAACGGGGGCCAGTTCTTCTCATCTATCTGAACACCAGATTTAGCAATAGCATCCTCTCTCCGTTTAATATCCATTTCTTTCT
TCCTAAGCTCAGCTTCCCAGTCAGCAAGCTTTCTCTGTTTCTGTGAAGAGTCATTCATGTTATCCAAGGGAATATCAACAGTAGCA
TCGAGGCTTTGACCAAATCCAGCTGGCCTAGATGCAGCAGGTACCCGTCCACCGCCTTTAGAGAAGGGATTGACGATTTCTTCTTC
CTCCTCATCGAAAGGGTTGGGATCGTGGTGGCGATTCATTGTTGGTTGCAGATCCCTAGATTCACGAACTCTAATCTTATTCTTCC
GATAAGAAAAGAGAGAGAGAGAGAGAAAGAGAGATAGCAAACCGACTGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002890966 secretory carrier membrane protein family protein [Arabidopsis lyrata subsp. lyrata]13615e-148
NP_174485 secretory carrier-associated membrane protein 4 [Arabidopsis thaliana]13453e-146
BAH20345 AT1G32050 [Arabidopsis thaliana]13401e-145
BAJ33899 unnamed protein product [Thellungiella halophila]12584e-136
BAH20435 AT1G32050 [Arabidopsis thaliana]11796e-127

Swiss-Prot top hits (Blast detail)Scoree value
Q9C6X2 Secretory carrier-associated membrane protein 413451e-147
Q0JAI9 Secretory carrier-associated membrane protein 69364e-100
Q6Z8F5 Secretory carrier-associated membrane protein 59176e-098
Q9ZTX0 Secretory carrier-associated membrane protein8692e-092
Q9SKT3 Secretory carrier-associated membrane protein 18541e-090

TrEMBL top hits (Blast detail)Scoree value
B9DHX8 AT1G32050 protein13409e-146
B9DI68 AT1G32050 protein (Fragment)11794e-127
C6TC38 Putative uncharacterized protein11113e-119
A9PAD5 Putative uncharacterized protein11033e-118
C6TGL4 Putative uncharacterized protein11015e-118

Arabidopsis top hits (Blast detail)Scoree value
AT1G32050.1 secretory carrier membrane protein (SCAMP) family protein13513e-149
AT2G20840.1 secretory carrier membrane protein (SCAMP) family protein8541e-091
AT1G61250.1 SC3 (SECRETORY CARRIER 3); transmembrane transporter8494e-091
AT1G03550.1 secretory carrier membrane protein (SCAMP) family protein7877e-084
AT1G11180.1 secretory carrier membrane protein (SCAMP) family protein7724e-082

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
126  50%
 
202  17%
 
71  8%
 
113  25%

Unigene MembersMember information