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Information for unigene UN21293

FASTA Sequence
Unigene ID:UN21293 Length: 1321
GGAAATGAGTTTGAGTGGTTGTTGTAGGAATCCGAGAATCACAATAAAGGCTCTTCTGCATTTACATCTCAGGCGATCCAGTCTCT
ATCATCGTATCCAAAGTAGGCACCTTTCATCCTCCTCTTCAATGGCCGATCTCAAGTCAACCTTCCTCAACGTCTACTCCACCCTC
AAATCCGACCTCCTCCACGACCCTTCCTTCGAATTCACCGATGAATCCCGTCTCTGGGTCGAAAAGATGTTGGATTACAATGTACC
GGGAGGGAAGCTGAATCGTGGTCTCTCTGTCGTGGACAGCTTCAAGCTTTTGAAGGAAGGTGAAGATTTGACCGAGGAAGAGGTTT
TCCTCTCGTGTGCTCTTGGTTGGTGCATCGAATGGCTTCAAGCTTATTTCCTTGTGCTTGATGACATTATGGATAACTCTGTCACT
CGACGTGGACAACCTTGCTGGTTCAGAGTTCCTCAGGTTGGTATGGTTGCCATCAACGATGGGATCTTACTTCGCAATCACATCCA
CAGGATCCTCAAGAAGCACTTCAGGGGAAAGCCTTACTATGTTGACCTCGTTGATCTCTTTAATGAGGTAGAGATGCAAACAGCTT
GCGGCCAGATGATTGATCTGATCACCACCTTCGAAGGCGAAAAGGATTTGGCCAAGTACTCATTGCCAATCCACCGGCGTATTGTC
CAATACAAAACTGCTTATTACTCATTTTATCTCCCTGTTGCTTGTGCGTTACTTATGGCGGGCGAAAACTTGGAAAACCATATTGA
TGTGAAGAATGTTCTTGTTGACATGGGGATCTACTTCCAAGTGCAGGATGATTATCTGGATTGTTTTGCTGACCCAGAGACACTTG
GCAAGATAGGAACGGATATAGAAGACTTCAAATGCTCCTGGTTGGTGGTAAAGGCATTGGAACGCTGCAGCAAAGAACAAACTGAG
ATATTATATGAGAACTACGGTAAACCCGACCCATCAAACGTTGCTAAAGTGAAGGAGCTTTACAAAGAGCTTGACCTTGAGGGAGT
GTTCAAGGAGTATGAGAGCAAAAGCTACGAGAAGCTGACTGGAGTGATTGAGGCTCACAAAAGTAAAGCAATCCAAGCAGTGCTCA
AATCCTTCTTGGCTAAGATCTACAAGAGGCAGAAGTAGTCAGTCTTTAAGCCTTCCCAGATTATGTCTTTGATTCTTCTTTGGTGA
TTTGTGTAATTCTGTTAAGTGCTCTTCATTTTCTTAAACTAAAAAGTTATCATTTCCACTTTTATCTATTCACAAAATTTCGTCCC
TTTTAAAAAATATTATATATTAAACCTTCAG

Annotation(GO term)
GenBank top hits (Blast detail) ScoreE value
NP_199588 farnesyl diphosphate synthase 1 [Arabidopsis thaliana]17739e-196
XP_002863368 farnesyl diphosphate synthase short form [Arabidopsis lyrata subsp. lyrata]17093e-188
AAB07264 farnesyl diphosphate synthase short form [Arabidopsis thaliana]17074e-188
CAA53433 dimethylallyltransferase [Arabidopsis thaliana]16913e-186
XP_002868080 hypothetical protein ARALYDRAFT_493157 [Arabidopsis lyrata subsp. lyrata]16242e-178

Swiss-Prot top hits (Blast detail) ScoreE value
Q09152 Farnesyl pyrophosphate synthase 1, mitochondrial17734e-197
Q43315 Farnesyl pyrophosphate synthase 216193e-179
P49351 Farnesyl pyrophosphate synthase 115101e-166
P49352 Farnesyl pyrophosphate synthase 214851e-163
O24241 Farnesyl pyrophosphate synthase 114195e-156

TrEMBL top hits (Blast detail) ScoreE value
D3K2X4 Farnesyl pyrophosphate synthase15012e-164
O04838 Farnesyl pyrophosphate synthase14941e-163
Q8RVK7 Farnesyl pyrophosphate synthase14887e-163
Q8L7F4 Farnesyl diphosphate synthase14879e-163
Q94F74 Farnesyl diphosphate synthase14879e-163

Arabidopsis top hits (Blast detail) ScoreE value
AT5G47770.1 FPS1 (FARNESYL DIPHOSPHATE SYNTHASE 1); dimethylallyltranstransferase/ geranyltranstransferase17743e-198
AT4G17190.1 FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2); dimethylallyltranstransferase/ geranyltranstransferase16202e-180
AT4G17190.2 FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2); dimethylallyltranstransferase/ geranyltranstransferase11839e-130


EST library breakdown for ESTs in the assembly
 
9 8    22%
 
10 7    19%
 
8 6    16%
 
11 4    11%
 
7 3    8%
 
12 5    14%
 
21 1    3%
 
20 1    3%
 
6 1    3%
 
19 1    3%

Unigene Members
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