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Information for unigene UN21312
| FASTA Sequence |
| Unigene ID: UN21312 | Length: 831 |
| SNP | GGGCAAACACACAGACACAGAAGGTAAAGCAAAAATGGTGTCGGGATCAGGTATATGCTCGAAGCGCGTGGTCGTCGACGCGCGCC
ACCACATGCTGGGGCGTCTGGCGTCGATCGTGGCCAAGGAGCTGCTCAACGGGCAGAAGGTCGTCATCGTTAGATGCGAGGAGATT
TGCCTCTCCGGTGGACTCGTTCGCCAGAAAATGAAGTACATGAGGTTCCTTCGCAAACGTATGAACACGAAGCCTTCTCACGGACC
CATTCACTTCCGTGCTCCCTCCAAGATCTTCTGGCGTACTGTTCGCGGTATGATTCCACACAAGACGAAGCGTGGATCTGCTGCAC
TTGCCCGCATGAAGGTGTTTGAAGGTGTGCCTCCACCGTATGACAAGGTCAAGAGGATGGTCATCCCCGATGCTCTCAAGGTCTTG
AGGCTTCAAGCTGGTCACAAGTACTGTCTTTTGGGCCGTCTCTCTTCTGAAGTCGGGTGGAACCACTACGACACCATCAAGGAGCT
GGAGACGAAGAGGAAGGAGAGATCCCAAGTTGTTTACGAGCGTAAGAAGCAGCTTAACAAACTTAGAGCTAAGGCTGAGAAGGTGG
CTGAAGAGAAGCTTGGAGCACAGCTCGAGATTCTTGCACCAGTCAAGTACTGAGATGATCATTAATAGTTTGTCTTTGCATGTTTT
GAGCCGACCTATAATACTTTTTTCACTTTCACTTAGGTGTTGTATCGGATTTTGCCGTAATGTTTTCTTTCTTGAGTTACAATTTA
TTTATATCCCATGTCTTTCTACTTCTCTTTTTAACTTCTATCAGAATTTGTTTATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002865669 60S ribosomal protein L13A [Arabidopsis lyrata subsp. lyrata] | 1031 | 5e-110 |
| NP_199687 60S ribosomal protein L13a-4 [Arabidopsis thaliana] | 1023 | 4e-109 |
| XP_002863167 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1022 | 6e-109 |
| XP_002883564 60S ribosomal protein L13A [Arabidopsis lyrata subsp. lyrata] | 1018 | 2e-108 |
| NP_193053 60S ribosomal protein L13a-3 [Arabidopsis thaliana] | 1009 | 2e-107 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FKC0 60S ribosomal protein L13a-4 | 1023 | 2e-110 |
| Q9SVR0 60S ribosomal protein L13a-3 | 1009 | 8e-109 |
| Q9LRX8 60S ribosomal protein L13a-2 | 1008 | 1e-108 |
| Q9SFU1 60S ribosomal protein L13a-1 | 1000 | 9e-108 |
| O49885 60S ribosomal protein L13a | 934 | 4e-100 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RWI8 60S ribosomal protein L13a, putative | 993 | 9e-106 |
| B9S526 60S ribosomal protein L13a, putative | 990 | 2e-105 |
| C6SYZ8 Putative uncharacterized protein | 984 | 1e-104 |
| C6TFI1 Putative uncharacterized protein | 982 | 2e-104 |
| A9PB37 Putative uncharacterized protein | 978 | 5e-104 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G48760.1 60S ribosomal protein L13A (RPL13aD) | 1024 | 1e-111 |
| AT5G48760.2 60S ribosomal protein L13A (RPL13aD) | 1024 | 1e-111 |
| AT4G13170.1 60S ribosomal protein L13A (RPL13aC) | 1010 | 6e-110 |
| AT3G24830.1 60S ribosomal protein L13A (RPL13aB) | 1009 | 7e-110 |
| AT3G07110.1 60S ribosomal protein L13A (RPL13aA) | 1001 | 6e-109 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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