 |
Information for unigene UN21320
| FASTA Sequence |
| Unigene ID: UN21320 | Length: 1377 |
| SNP | GGTGTGTAACATTTTGTGTCTTATTGATCCAAAGTCGTATGTTCTTTACATAATAAAAACCCATATACATAGCAATAGATACGATA
TTGTACTCTTTTGTTCACTTTGCTTTAGAGAAGAACCTGCTGAGTCCTTTAGAGTGTTTCCCAGGGGTGAATCCGGAAGAGGAAGA
TGATGAGTTTGACTTGGTGTGTCTATGTTTCGACCCTACAGGAGATCTCATTGTGGTCATCGATGGTGTGTCTTTGTGTGAAGGCG
AACTCGATGTTTTGTCTTGAGGATTTGTGGAAGTTGTGTATTCGTTTTCTTCTACTGTGTTTAGGGCTTGTTCTAGGCTTGGAGAA
GAAGCAACCTGTTCTGTTTGAGGAGACATGGGATTTGAGTTGCTTCCCGAGAAGCAATATAGTCTCTTGACACTCTTGTAGCTTCT
CTGCAGCAGCTGCTAATTCATTGTCCTGTTTGCTTTTTGGATCATCAGCTTCAGTTACTGAACTAGTCTGGCAGGTTTGGTTGTTC
CTTTGTAATTGCTCCTCGAGTTCTTGGCACTTGGTTAAAGCCTCACGGTGGTTTTCCTTTTCCTCATGAAGCTCATCTTCTAAGTT
TTCGATTTTGACTTTAAGAGAACTCAACTCGACTTCCAGCTCCGCTGATCTAGTTTCGAGAGATCTGTATGATTCAACCATGCATT
TGAGCTGTGTCTCGGCCATGCCATTAGACTTCCGAGCAAATTCCAAATCTGACTTCACTTCAGCAAGAATCTGCTCTGTTTCTTGT
AGTTTCGACTTAGTTGCTTCAAGATCTGCTTCACAGCTTGCAAGGTTGGTCTCTGCCTTTTCTTTCTCGAGTTTCAACTCTTCAAA
CTCTTCTGATGTAAATTTACGAGTAACTGGTGAGAGCTTGTGTTGGTAGCCGATGCTATCATCTGGAATCTCGGAATCAGAGCTCT
GAGAACAACCACTCTGGTAATGCTCACCTGATAGAGCGACTTTATCAATGCAATCAGGGCTGTGAATCTCCTCCACTTCAGATGCT
TTAAGTCCCACCACGTTGATTTTCAGCTCAGTAGCTTCTACTAAAACTCGCGAGAGGTCAAACAAAAAGTCAACCAGAGTCTTCTC
CTTGCTCAATACTTTGTCCAAAGTAGCAGACAACTCTTGAACTTTTTGGGAGAATGTGTCCTCCTCACACAGCGTTGCTTCTTTCG
CAAGGTAGGAAACAAAGTGGTAAATCTGAGAGAGAGCATGAGCAAGTTCCTGTGTAACTTTTTCCTCTGTGGTCTCATTTGGAATA
GCTATCTCCTTCTCTTCTGTATGACCGTTTACATTAGGTCCACCTGCTTCTTCAATGGCACACTGTACCTCTGCCAAAATCTTCTC
C
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_173412 filament-like plant protein 4 [Arabidopsis thaliana] | 822 | 2e-085 |
| AAG12549 Unknown Protein [Arabidopsis thaliana] | 822 | 2e-085 |
| BAD95104 hypothetical protein [Arabidopsis thaliana] | 822 | 2e-085 |
| XP_002893071 hypothetical protein ARALYDRAFT_335233 [Arabidopsis lyrata subsp. lyrata] | 821 | 2e-085 |
| XP_002306918 predicted protein [Populus trichocarpa] | 716 | 4e-073 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q0WSY2 Filament-like plant protein 4 | 1203 | 5e-131 |
| Q9C698 Filament-like plant protein 6 | 606 | 9e-062 |
| O65649 Filament-like plant protein 5 | 440 | 2e-042 |
| Q8LLE5 Filament-like plant protein (Fragment) | 211 | 6e-016 |
| Q9GZ71 Tropomyosin | 127 | 3e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9H4U9 Predicted protein | 716 | 3e-073 |
| B9GQX2 Predicted protein | 519 | 2e-050 |
| A5ASD5 Putative uncharacterized protein | 510 | 2e-049 |
| B9R869 Myosin heavy chain, striated muscle, putative | 506 | 6e-049 |
| B8AK11 Putative uncharacterized protein | 418 | 9e-039 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
