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Information for unigene UN21322

FASTA Sequence
Unigene ID: UN21322Length: 1275 SSRSNP
CTCAGACCGAACACAGAAACAAGAAAAACAAAACACGAAGTTTTCGTTTGAGAGCTCAAAGGTTCCAGATTTCAAAAGAGCTTCTT
TTTTATTTCTCCAGAATCATTTCTAGATCAATAGCGGTTCTGTCATTGGTGAGAAGATGTCGGATCATCTGAGTTTATGCACGGAT
CGTCTCATAACGGGTGAGAGCTTGGAGTCAGAAAAGGATTGTGGAGAAAGTTCTTGTCCTCAAGGCAGAGATGTGGCTTCTTCTTC
TTCTTCGTCGTCGTCTGTGTCTGTGGATGAAGCTGAAGATGCCAGGAAGTACTATGCTGTTGTCCCTGCGGAAGAGGAACCGCTTC
TCCAGTCTGTTGAGTGCCGTATTTGCCAGGAGGAAGATATCACTAACAACTTGGAGGCTCCTTGTGCTTGCAATGGCAGTTTGAAG
TATGCGCACCGCAAGTGTGTTCAGCGTTGGTGTAATGAGAAAGGCGACATTATCTGCGAAATATGCCACCAGCCTTATCAATCTGG
ATATACAGCACCTCCACCTCCTCCTCCTGATGAAACTATTATTCACATTGGTGAGGATTGGGAGACTGGAGTTCACTTGGACTTGA
GCGACCCGCGCATTCTTGCAATGGCTGCAGCGGAACGCCATTTCTTGGAAGCTGACTATGACGAGTACTCTGAGTCTAACTCAAGC
GGTGCTGCCTTCTGTCGCTCTGCTGCTCTCATCCTGATGGCACTTTTACTGTTAAGAGATGCACTAAACCTCACGACTAATCCAGA
TGACGAGGATGATCCCACTGCCTTCTTCTCTCTTTTTCTTCTTCGTGCTGCTGGTTTTCTCCTGCCATGTTACATCATGGCATGGG
CCATTGGAATTCTCCAGCGCCGGAGGCAAAGACAGGAAGCTGCTGCTCTAGCTGCCGCCGAAGTTGCCTTCATGATACACGGTGGT
GTGCCTCAACGCAGGGGACTTCATTTTGCTTTATCGCCAGAGCAGCCGCCAGTATCCAACCCAACACCAGTCTGATCCTTCTCCCA
GCAATGATTCCCCGGTAAGACTGTTAAGACAAAACCCTGAACTTTGTTGTAAGAACTTTCCACCTACTTATGCTTCTTCTTCTTCA
CATGTTTTATCATTTTGCTCGTATGTTTATGTTCTCTGAATCTGTTAAATGTTACTTCTCTACTTTTAAATGTTGTCAAAGCTCTC
GGGGCATTATGTACAGTTTTATTGTTATTATTACTAGGAATCATCACCCCGCGCACGCGCGAGGGTTCATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ADA67984 RING-type E3 ubiquitin ligase [Brassica napus]13624e-148
XP_002875846 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]12487e-135
NP_190339 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]12452e-134
NP_850668 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]10812e-115
XP_002864796 hypothetical protein ARALYDRAFT_496422 [Arabidopsis lyrata subsp. lyrata]10353e-110

Swiss-Prot top hits (Blast detail)Scoree value
Q86YJ5 E3 ubiquitin-protein ligase MARCH91372e-007
Q3TZ87 E3 ubiquitin-protein ligase MARCH91372e-007
Q32L65 E3 ubiquitin-protein ligase MARCH21363e-007
Q86UD3 E3 ubiquitin-protein ligase MARCH31363e-007
Q8BRX9 E3 ubiquitin-protein ligase MARCH31363e-007

TrEMBL top hits (Blast detail)Scoree value
D2KC47 RING-type E3 ubiquitin ligase13623e-148
Q9SN83 Putative uncharacterized protein At3g4755012451e-134
A9CEI2 Uncharacterized protein At3g47550.210811e-115
Q9FJJ6 AT5g62460/K19B1_710263e-109
Q3E6V0 At3g475509278e-098

Arabidopsis top hits (Blast detail)Scoree value
AT3G47550.3 zinc finger (C3HC4-type RING finger) family protein12464e-137
AT3G47550.6 zinc finger (C3HC4-type RING finger) family protein12464e-137
AT3G47550.2 zinc finger (C3HC4-type RING finger) family protein10816e-118
AT5G62460.1 zinc finger (C3HC4-type RING finger) family protein10261e-111
AT3G47550.1 zinc finger (C3HC4-type RING finger) family protein9274e-100

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
95  63%
 
62  25%
 
101  13%

Unigene MembersMember information