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Information for unigene UN21327
| FASTA Sequence |
| Unigene ID: UN21327 | Length: 667 |
SSR | | GGGAGCCGCCGGAAGAAGCGAAACTCTTCGTCGGAAACTTGGCTTACGATGTTGACAGTCAAGCCTTGGCTATGCTCTTTGAGCAA
GCCGGTGCTGTTGAAATCGCTGAGGTTATCTACAATAGGGAGACAGACCAGAGTCGTGGGTTTGGATTTGTGACGATGAGTACCGT
GGAAGAAGCTGAGACTGCTGTTGAGAAGTTCAACCGTTATATCTGAACGGACGGCTTCTGACAGTAAACAAGGCAGCACCGAGAGG
ATCACGTCCAGAACGCCAACCTAGGGTGTATGAACCTGCGTTCAGGGTCTATGTGGGAAACCTGCCGTGGGATGTGGACAACGGTC
GTCTAGAGCAAGTATTCAGTGAGCATGGTAAAGTCGTGTAAGCTCGTGTGGTTTATGACCGTGAGACGGGTCGTTCACGTGGGTTC
GGTTTTGTCACAATGTCTAACGAGACTGAACTCAACGACGCTATCGCTGCTCTTGATGGACAGAACATGGAGGGTAGAGCAATCAG
AGTGAACGTAGCTGAGGAGCGTCCGAGGCGTGGGTTTTAAAAGGATTGAGATTATCTCTTCTGCCAGTTTCCTCTCTCTCTCTCTT
CCTATCGCTTTGCATTTTGTTTAGACGAGATTCTTACACTCTTTGATGATTTTTTGTTGTGTCCG
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002867645 RNA-binding protein cp31 [Arabidopsis lyrata subsp. lyrata] | 566 | 3e-056 |
| BAA06520 RNA-binding protein cp31 [Arabidopsis thaliana] | 525 | 2e-051 |
| BAA06521 RNA-binding protein cp31 [Arabidopsis thaliana] | 525 | 2e-051 |
| NP_194208 ribonucleoprotein [Arabidopsis thaliana] | 525 | 2e-051 |
| AAA18379 RNA-binding protein 2 [Arabidopsis thaliana] | 525 | 2e-051 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| Q04836 31 kDa ribonucleoprotein, chloroplastic | 525 | 7e-053 |
| P19682 28 kDa ribonucleoprotein, chloroplastic | 471 | 1e-046 |
| P28644 28 kDa ribonucleoprotein, chloroplastic | 452 | 2e-044 |
| P19683 31 kDa ribonucleoprotein, chloroplastic | 444 | 2e-043 |
| Q08935 29 kDa ribonucleoprotein A, chloroplastic | 287 | 3e-025 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q39209 RNA binding protein (Fragment) | 525 | 1e-051 |
| Q94EH5 AT4g24770/F22K18_30 | 521 | 3e-051 |
| B9RAR1 Ribonucleoprotein, chloroplast, putative | 514 | 2e-050 |
| B9I3I8 Predicted protein | 500 | 8e-049 |
| B0M184 Chloroplast RNA binding protein | 494 | 4e-048 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT4G24770.1 RBP31 (31-KDA RNA BINDING PROTEIN); RNA binding / poly(U) binding | 526 | 5e-054 |
| AT5G50250.1 31 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, putative / RNA-binding protein cp31, putative | 483 | 5e-049 |
| AT2G37220.1 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | 258 | 6e-023 |
| AT3G53460.1 CP29; RNA binding / poly(U) binding | 257 | 8e-023 |
| AT3G53460.2 CP29; RNA binding / poly(U) binding | 257 | 8e-023 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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