Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN21331

FASTA Sequence
Unigene ID: UN21331Length: 1207 SSR 
GGGATCACTTTTCTTTTACAGGAAACCTAGCGACCGTATCAGAAAAGAGAAGAAGCCTTACCCATTTGTCCTGCTCATTTCATTCG
TCTGCGCCGCGTGCTTGATTTGATTCCTCGCAAGCAAACCTTCTTCCATCACACCTTTTTGGCACCACATCTCTTTTACTTCCACA
TCGTTGTATCAAATCATGGCTGATGAAAATAATGAGATAAAGGAAGTGAAGGACGATCAAGATCTCGCACCGTTTGATCCAACCAA
GAAGAAGAAGAAGAAGAAAGTTGTCATTCAAGATCCTATCGAGGACTGTACAGAGTCATCACAGCCCGAGAAGTCTGATTCACTGC
CTGCTAATGATGGCCTTGAGAGTTCCTTTGCTGGTCTGAAGAAAAAGAAGAAGAAGCCTGTTGAAATTTCAAGCTCATTGAATGAA
GAAAGTCTCGATACTGCAGAAGATTTGGATGAGCATGCTAATGATGACGAGGAAGATGCAGAGGGGATAGATTTACAGCAGCAGCA
GCAACGTTACCCCTGGGAGGGAAGTGATAGGGATTACATATACGACGAGCTTCTTGGCAGAGTCTTCAACATTCTCCGTGAAAACA
ATCCGGAGCTTGCTGGAGATAGACGTCGTACGGTTATGAGGCCTCCTCAAGTTCTTCGTGAGGGAACGAAGAAGACAGTGTTTGTC
AACTTTATGGATCTTTGCAAGACGATGCATCGTCAGCCGGATCATGTAATGAATTTCTTGCTTGCTGAGTTGGGTACGAGTGGTTC
GCTTGACGGGCAGCAACGATTGGTTGTCAAGGGGAGATTCGCACCCAGAATTTCGAAGGATACTGCGGCGTTACGTCACTGAGTAC
GTCATTTGCCTTGGTTGCAGAGTCCGGACACAATTTTTTCAAAGGAGAATTGTTTTTTTTTTTTCAGATGCGAAAAGTGTGGATTT
GGACGATCGGTGGCGCAGATCAAAGCTGGTTTTGTTGCTCGTGTTGGTCGCAGGAAGACTTGAGAAATTGGTGGGGGCAGTGAACA
CTAAAGAGCTTGTTATGGAGTTGAGAAACTTGTTTTTTTTTTTTGTTTTTTTTTAAAGAATATGAAGTGTAATTTACTTTGTTCTC
CATACTATGTCTTGAAAAAAAATCAAATATGGAATAGGTTTTGAGCCTTCAACTTTGTTAGATCCATGTGGCTCACTTAAAGTCGA
ATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_974817 translation initiation factor eIF-2 beta subunit [Arabidopsis thaliana]10131e-107
NP_197592 translation initiation factor eIF-2 beta subunit [Arabidopsis thaliana]10067e-107
AAK29672 protein synthesis initiation factor eIF2 beta [Arabidopsis thaliana]10067e-107
XP_002874023 protein synthesis initiation factor eIF2 beta [Arabidopsis lyrata subsp. lyrata]10004e-106
CBI15806 unnamed protein product [Vitis vinifera]9242e-097

Swiss-Prot top hits (Blast detail)Scoree value
Q41969 Eukaryotic translation initiation factor 2 subunit beta10072e-108
P55871 Eukaryotic translation initiation factor 2 subunit beta8746e-093
O24473 Eukaryotic translation initiation factor 2 subunit beta8291e-087
Q99L45 Eukaryotic translation initiation factor 2 subunit 25101e-050
Q5E9D0 Eukaryotic translation initiation factor 2 subunit 25054e-050

TrEMBL top hits (Blast detail)Scoree value
Q3E987 Putative uncharacterized protein At5g20920.210138e-108
B9I766 Predicted protein8928e-094
A9PI50 Putative uncharacterized protein8882e-093
C6TAV3 Putative uncharacterized protein8855e-093
C6TP03 Putative uncharacterized protein8847e-093

Arabidopsis top hits (Blast detail)Scoree value
AT5G20920.2 EIF2 BETA; translation initiation factor10207e-111
AT5G20920.1 EIF2 BETA; translation initiation factor10082e-109
AT5G20920.3 EIF2 BETA; translation initiation factor10082e-109
AT3G07920.1 translation initiation factor3961e-038
AT5G01940.1 eukaryotic translation initiation factor 2B family protein / eIF-2B family protein2662e-023

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  33%
 
111  33%
 
121  33%

Unigene MembersMember information