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Information for unigene UN21343
| FASTA Sequence |
| Unigene ID: UN21343 | Length: 1149 |
SSR | | GGAAATGGTAGTAGATGTTTCTTTAGCACACACACACAGTTTCTTCTGTCTCTCTCTCTCTCCCCTATTCTAAAGCCGAGATTTGT
GCGAATGCTCTAGTCCTTTTTAAAAGAAACACTTCGCCATATTCACTTAGCCTGAGCTCTTCTTTCTTCTTCGTGACCTGATATTG
CGTTACACAGCACAGCACGATCTTCCAAAAGGACATGTAATGCTGTTTGGGATTTTTCCTTTTGGACTGAGAAAACTCAAAACATA
GAGAGTGTGTGAGAGAGAAACATCTTTGTCTTCTCGGTTTTTGTGTTGTCAAGAAGCTCCAGGACAAAAAAAATAATACAATTGTT
TTAGGGTTTTGAGGAAGAAAAGTTTGAGCTTTGAGAAGTTGTGAGTGGTGTGTTCTTGAAGAACAAAGCTTTTTATTACATTCCTC
TGCCAATTCGTGACTCTCACCTCTCCCCGGATGGAGTTCTCTAGAGAAGCTGGAATGATGATGGAAAATAAGCGGAGTGTATGCTC
TCTCGAAGAAAGTAGCATCAAGCGTCACAAGTCTGATCTCTCTTTCAGTTCCAAGAGAAAGGACAAAGCTGGAGAACGTATCTCAG
CTCTTCAACAGATAGTTTCCCCTTACGGAAAGACCGACACTGCATCAGTTCTTCAAGACGCGTTTCATTACATAGAGTTTCTACAT
GAACAAGTGAAGGTGCTAAGCGCTCCGTATCTGCAAACAATGACCGCTGCTACGCAGGAGGAGCTGGAGCAGTACAGCCTGAGAAA
CAGAGGATTATGTCTTGTTCCAATGGAGTATACAGCAGGAGTTGCTCAAAGCAACGGTGCTGATATCTGGGCGCCCGTGAAGACTC
CTCCATCTCCAGCTTTCGGCGTCAAGTCTCAATCACCCTTTAGATGACTGATTCAGACTCTTCCCAACCTACTAAGATCTTTGTCT
TAAGCCTTAAGAAGATGGTCAATTGTTATTGTTCAGATCCTGCCTCTGTATCATACGTAGACCAGAGGCACATGAAGTTGGTTTGG
AACAGCTCAGAGTTGGTGATGGCTGTTTCTATTTGACCGCCTTAAATATGTAATTTGCCTAAGCTTAAACCAAACGATTCTAATGC
TAAGTAATCTTTATGCCAAAGCTTGCCTCAG
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| GenBank top hits (Blast detail) | Score | e value |
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| BAJ34140 unnamed protein product [Thellungiella halophila] | 670 | 6e-068 |
| NP_563746 basic helix-loop-helix domain-containing protein [Arabidopsis thaliana] | 661 | 7e-067 |
| XP_002889560 hypothetical protein ARALYDRAFT_887762 [Arabidopsis lyrata subsp. lyrata] | 659 | 1e-066 |
| BAH20200 AT1G05710 [Arabidopsis thaliana] | 641 | 1e-064 |
| AAM65410 ER33 protein [Arabidopsis thaliana] | 611 | 4e-061 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LT67 Transcription factor bHLH113 | 268 | 1e-022 |
| Q8GXT3 Transcription factor bHLH123 | 194 | 4e-014 |
| Q9M0X8 Transcription factor bHLH114 | 181 | 1e-012 |
| Q8VZ22 Transcription factor bHLH103 | 180 | 2e-012 |
| Q94JL3 Transcription factor bHLH112 | 180 | 2e-012 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q7XJU2 BHLH transcription factor | 661 | 5e-067 |
| B9DHI3 AT1G05710 protein (Fragment) | 641 | 1e-064 |
| Q8LAF0 ER33 protein | 611 | 3e-061 |
| Q7XJU1 BHLH transcription factor | 500 | 2e-048 |
| B9N5Z0 Predicted protein | 446 | 4e-042 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G05710.1 ethylene-responsive protein, putative | 662 | 2e-069 |
| AT1G05710.4 ethylene-responsive protein, putative | 662 | 2e-069 |
| AT1G05710.3 ethylene-responsive protein, putative | 662 | 2e-069 |
| AT2G31730.1 ethylene-responsive protein, putative | 501 | 9e-051 |
| AT1G05710.2 ethylene-responsive protein, putative | 367 | 3e-035 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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