Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN21358

FASTA Sequence
Unigene ID: UN21358Length: 1044  SNP
GGGATCTCAGCGCTTTCACCATCATCTCGAGATTACTTCAGGACTTTAGGGTTTCAGTGATCCGCAGCTGCACACATCAAACATGG
CGACTCAAATTAGCAAGAAGAGAAAGTTTGTAGCTGACGGTGTGTTCTACGCCGAGTTGAACGAGGTTCTAACCAGAGAGCTTGCT
GAAGATGGTTACTCTGGTGTAGAGGTTAGGGTTACTCCAATGAGGACTGAGATTATCATCAGAGCCACACGTACTCAAAATGTTCT
CGGTGAGAAGGGGAGGAGGATCAGAGAGTTGACATCTCTTGTTCAGAAGAGATTCAGGTTTCCTCAAGACAGTGTTGAGCTTTACG
CTGAGAAGGTTACCAACAGAGGTCTCTGCGCTATTGCTCAGGCTGAGTCTCTCCGTTACAAGCTCCTCGGTGGACTTGCTGTTCGC
AGGGCTTGCTATGGTGTCTTGAGATTCGTCATGGAAAGTGGTGCTAAAGGATGTGAGGTGATTGTGAGTGGAAAGCTTCGTGCAGC
ACGTGCCAAGTCCATGAAATTCAAGGACGGTTACATGGTTTCCTCTGGTCAGCCAACCAAGGATTACATCGACTCTGCTGTCAGAC
ATGTTCTGCTTAGACAGGGTGTTCTCGGAATCAAGGTGAAGGTCATGCTTGACTGGGACCCTAAGGGAATAAATGGACCAAAGACA
CCATTGCCTGATGTTGTGATCATCCATGCTCCCAAGGAGGATGATGTCAACTCTGCTCCTGCTCAGGTTACTGCTCCGGCTGCCCC
TTGCACCGGAAGCTCCCCTCACAGCAGTAGATTACCCTGAGATGATCCCAGTCGCTTAGAAGAAACCCTTTGGTTACTCTTACCAT
GGGATACTTCTGTTTTTGTTATAACTATTCTGTGCCTCTTGATACTCGGTAGTTGTTTTTCTATATCCTCCAATTAGACAAGTTTT
TTTTCTCATGGTTCCAAACTTATGTCAATTATTTTTTAGACTGGATGCTTATGTTCAATGTAATTTTTGGTCTTAATAAGAACAAA
AATTACTACTAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_190955 40S ribosomal protein S3-2 [Arabidopsis thaliana]10953e-117
XP_002870433 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]10944e-117
NP_198403 40S ribosomal protein S3-3 [Arabidopsis thaliana]10863e-116
XP_002879336 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]10829e-116
NP_180719 40S ribosomal protein S3-1 [Arabidopsis thaliana]10802e-115

Swiss-Prot top hits (Blast detail)Scoree value
Q9M339 40S ribosomal protein S3-210951e-118
Q9FJA6 40S ribosomal protein S3-310861e-117
Q9SIP7 40S ribosomal protein S3-110807e-117
Q90YS2 40S ribosomal protein S39042e-096
P02350 40S ribosomal protein S3-A9032e-096

TrEMBL top hits (Blast detail)Scoree value
B9DHB0 AT5G35530 protein10791e-115
A9PAW1 Predicted protein10307e-110
B7FH64 Putative uncharacterized protein10307e-110
B7FGM5 Putative uncharacterized protein10262e-109
B9RQV4 40S ribosomal protein S3, putative10252e-109

Arabidopsis top hits (Blast detail)Scoree value
AT3G53870.1 40S ribosomal protein S3 (RPS3B)10951e-119
AT5G35530.1 40S ribosomal protein S3 (RPS3C)10861e-118
AT2G31610.1 40S ribosomal protein S3 (RPS3A)10806e-118

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
83  16%
 
99  47%
 
73  16%
 
64  21%

Unigene MembersMember information