Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN21365

FASTA Sequence
Unigene ID: UN21365Length: 649 SSR 
GGTGCAGCCGAGCAGGTATTGATAGGAAAGATCTCAACGGGTGCACAAAACGATCTAGAGAAAGTGACAAAGATGACATACGCGCA
AGTAGCCGTGTACGGTTTCAGCGACAAGGTCGGACTCCTCTCGTTTCCGCCGAGGGATGATGGATACGACTTCAACAAACCGTACA
GCAACAAGACGGGCGCGATCATAGACGAGGAAGTGGGGGAATGGGTGGGGAGAGCTTACGAGAAGACGGTGGAGCCGATAGAGACG
CACAAGGAGAAAGTGGCTGAGATCGCCGAGCTTTTGCTGGAGAAGGAAGTGCTGCATCAGGATGATCTTTTGAAAGTTTTGGGTGA
GCGTCCGTTTAAACCGGCCGAGGTTACTAACTATGACCGGTTCAAGTCTGGGTTTGAAGAGAGTGAGAAGGAAGAGTCCTCCACAA
CGACTGGTGCACCTGTGGTGGATGAAGGAGCTCCACCGCCGCTTGAGCCGCAGGTGGTTCCTACGTAGGAGAGTGAGTGAGTGAGT
GAGTTCCACCTGTTACGATTGTAAATTTTTTTATTAAGAATGCAATAAAACACAACTAAAACAAACAAAACAAACAAAAACAAGTC
TCTTTGTTTTTCAATGTTGGTTAGCAATGAATATTATTTTTGTTATG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002881027 hypothetical protein ARALYDRAFT_344684 [Arabidopsis lyrata subsp. lyrata]7454e-077
NP_850129 cell division protease ftsH-3 [Arabidopsis thaliana]7411e-076
AAC33234 putative AAA-type ATPase [Arabidopsis thaliana]7411e-076
AAL36270 putative AAA-type ATPase [Arabidopsis thaliana]7365e-076
BAE98430 AAA-type like ATPase [Arabidopsis thaliana]6731e-068

Swiss-Prot top hits (Blast detail)Scoree value
Q84WU8 Cell division protease ftsH homolog 3, mitochondrial7416e-078
Q8VZI8 Cell division protease ftsH homolog 10, mitochondrial6459e-067
Q0DHL4 Cell division protease ftsH homolog 8, mitochondrial5751e-058
Q8S2A7 Cell division protease ftsH homolog 3, mitochondrial5534e-056
Q920A7 AFG3-like protein 12792e-024

TrEMBL top hits (Blast detail)Scoree value
B9SYC0 Mitochondrial respiratory chain complexes assembly protein AFG3, putative6217e-063
B9IFV8 Predicted protein5966e-060
Q94ES0 AAA-metalloprotease FtsH5813e-058
C5YZ91 Putative uncharacterized protein Sb09g0224905795e-058
B8AYZ7 Putative uncharacterized protein5752e-057

Arabidopsis top hits (Blast detail)Scoree value
AT2G29080.1 ftsh3 (FtsH protease 3); ATP-dependent peptidase/ ATPase7425e-079
AT1G07510.1 ftsh10 (FtsH protease 10); ATP binding / ATPase/ metalloendopeptidase/ nucleoside-triphosphatase/ nucleotide binding / zinc ion binding6466e-068
AT1G06430.1 FTSH8; ATP-dependent peptidase/ ATPase/ metallopeptidase/ zinc ion binding1162e-006
AT5G15250.1 FTSH6 (FTSH PROTEASE 6); ATP-dependent peptidase/ ATPase/ metallopeptidase/ peptidase/ zinc ion binding1162e-006
AT2G30950.1 VAR2 (VARIEGATED 2); ATP-dependent peptidase/ ATPase/ metallopeptidase/ zinc ion binding1125e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
93  75%
 
121  25%

Unigene MembersMember information