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Information for unigene UN21365
FASTA Sequence |
Unigene ID: UN21365 | Length: 649 |
SSR | | GGTGCAGCCGAGCAGGTATTGATAGGAAAGATCTCAACGGGTGCACAAAACGATCTAGAGAAAGTGACAAAGATGACATACGCGCA
AGTAGCCGTGTACGGTTTCAGCGACAAGGTCGGACTCCTCTCGTTTCCGCCGAGGGATGATGGATACGACTTCAACAAACCGTACA
GCAACAAGACGGGCGCGATCATAGACGAGGAAGTGGGGGAATGGGTGGGGAGAGCTTACGAGAAGACGGTGGAGCCGATAGAGACG
CACAAGGAGAAAGTGGCTGAGATCGCCGAGCTTTTGCTGGAGAAGGAAGTGCTGCATCAGGATGATCTTTTGAAAGTTTTGGGTGA
GCGTCCGTTTAAACCGGCCGAGGTTACTAACTATGACCGGTTCAAGTCTGGGTTTGAAGAGAGTGAGAAGGAAGAGTCCTCCACAA
CGACTGGTGCACCTGTGGTGGATGAAGGAGCTCCACCGCCGCTTGAGCCGCAGGTGGTTCCTACGTAGGAGAGTGAGTGAGTGAGT
GAGTTCCACCTGTTACGATTGTAAATTTTTTTATTAAGAATGCAATAAAACACAACTAAAACAAACAAAACAAACAAAAACAAGTC
TCTTTGTTTTTCAATGTTGGTTAGCAATGAATATTATTTTTGTTATG
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GenBank top hits (Blast detail) | Score | e value |
XP_002881027 hypothetical protein ARALYDRAFT_344684 [Arabidopsis lyrata subsp. lyrata] | 745 | 4e-077 |
NP_850129 cell division protease ftsH-3 [Arabidopsis thaliana] | 741 | 1e-076 |
AAC33234 putative AAA-type ATPase [Arabidopsis thaliana] | 741 | 1e-076 |
AAL36270 putative AAA-type ATPase [Arabidopsis thaliana] | 736 | 5e-076 |
BAE98430 AAA-type like ATPase [Arabidopsis thaliana] | 673 | 1e-068 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q84WU8 Cell division protease ftsH homolog 3, mitochondrial | 741 | 6e-078 |
Q8VZI8 Cell division protease ftsH homolog 10, mitochondrial | 645 | 9e-067 |
Q0DHL4 Cell division protease ftsH homolog 8, mitochondrial | 575 | 1e-058 |
Q8S2A7 Cell division protease ftsH homolog 3, mitochondrial | 553 | 4e-056 |
Q920A7 AFG3-like protein 1 | 279 | 2e-024 |
TrEMBL top hits (Blast detail) | Score | e value |
B9SYC0 Mitochondrial respiratory chain complexes assembly protein AFG3, putative | 621 | 7e-063 |
B9IFV8 Predicted protein | 596 | 6e-060 |
Q94ES0 AAA-metalloprotease FtsH | 581 | 3e-058 |
C5YZ91 Putative uncharacterized protein Sb09g022490 | 579 | 5e-058 |
B8AYZ7 Putative uncharacterized protein | 575 | 2e-057 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT2G29080.1 ftsh3 (FtsH protease 3); ATP-dependent peptidase/ ATPase | 742 | 5e-079 |
AT1G07510.1 ftsh10 (FtsH protease 10); ATP binding / ATPase/ metalloendopeptidase/ nucleoside-triphosphatase/ nucleotide binding / zinc ion binding | 646 | 6e-068 |
AT1G06430.1 FTSH8; ATP-dependent peptidase/ ATPase/ metallopeptidase/ zinc ion binding | 116 | 2e-006 |
AT5G15250.1 FTSH6 (FTSH PROTEASE 6); ATP-dependent peptidase/ ATPase/ metallopeptidase/ peptidase/ zinc ion binding | 116 | 2e-006 |
AT2G30950.1 VAR2 (VARIEGATED 2); ATP-dependent peptidase/ ATPase/ metallopeptidase/ zinc ion binding | 112 | 5e-006 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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