 |
Information for unigene UN21378
| FASTA Sequence |
| Unigene ID: UN21378 | Length: 1310 |
| SNP | GGACACATTCTCTCTCTCACACACATCAGAAACAAGAAATGGGAGGAGTTTCTTTCCTCTCCACTGTTCCCTCCTTCACCAACATC
AACAATCGTCAACATCTCACACTCTCTTCTTCTCATCGCTCTGTTCCCATTCGATGTTGCAAGATCGATCCTCAAGTTTCCGATAA
CACTTTATCATTTCACCGGCGGGATGTTCTCAAACTCGCCGGCACTGCCCTCGGAATGGAAATAACAGGTAACGGCTTCATTAACC
ATGTGGGCGATGCAAAAGCTGCTGATTTGAATCAGCGCAGGCAGCGATCCGAGTTTCAATCAAAGATCAAGCTTTCACTTTCCAAA
GCGGTTAAGGCTAAACCGGAGCTTGTACCTTCTTTACTAACTCTAGCTCTTAATGATGCTATGACTTATGATAAGGCTACAAAATC
CGGTGGAGCCAATGGATCCATACGGTTCAGCTCTGAGATAAGCAGAGCAGAGAACGCTGGGCTTTCTGATGGGTTAGCTCTCATAG
AGGAAGCCAAGAAGGAGATTGACTCGTTCTCAAAGGGTGGACCTATTTCATATGCAGATCTCATTCAACTCGCAGGGCAATCAGCG
GTGAAGGCAACATTTTTAGCATCAGCAATACGTAAATGCGGTGGAAATGAAGAGAAAGGGAACTTACTCTACACAGCATATGGTTC
AAGTGGTCAGTGGGCTTTGTTTGATAGACAATTCGGAAGGAGTGATGCAACAGAGGCTGATCCAGAAGGTAGGATCCCATTATGGG
GAAAAGCAACTGTGCAAGAGATGAAAGATAAGTTCATTGCCATTGGACTGGGTCCTCGTCAGTTAGCTGTAATGTCTGCATTCTTG
GGTCCTGATCAAGCCGCAACAGAAGAACTCTTAGCTAGCGACCCGCAAGTTGCACCATGGGTTCAGAAGTACCAACGAAGCCGTGA
AACTGTATCTCAGACAGATTACGAGGTTGATCTGATAACTGCATTGACAAAGCTAAGTGGTCTAGGGCAGCAAATCAACTATGAGG
CATATACGTATCCTGTCGAGCGGATCAATCTAAGCAAACTCAAGCTATGAGCATAGAGCGTGACAACAAGTTTTAAGTCAGTGCAC
ACTATGTATAACTTGAGCAAACTTGAACTCATTAATATATCCAAGATTTTTCTTAAAAGAAAATTAGAAACCAACATTAAAAGAAA
CCACAAGAATCAGTTAATGTGGTTCATGGTTTCAGAAATGAACCAACAAAACCATTTGGAATTTATTTCATTTTATTTGGAATTGT
CAAGAAGAAGCTACATGGCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ33725 unnamed protein product [Thellungiella halophila] | 1642 | 1e-180 |
| NP_192640 ascorbate peroxidase 4 [Arabidopsis thaliana] | 1554 | 2e-170 |
| XP_002872363 hypothetical protein ARALYDRAFT_489709 [Arabidopsis lyrata subsp. lyrata] | 1378 | 6e-150 |
| AAP72143 putative ascorbate peroxidase APX4 [Arabidopsis thaliana] | 1307 | 1e-141 |
| 3RRW Chain A, Crystal Structure Of The Tl29 Protein From Arabidopsis Thaliana | 1219 | 2e-131 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P82281 Probable L-ascorbate peroxidase 4, chloroplastic | 1554 | 1e-171 |
| Q9THX6 Putative L-ascorbate peroxidase, chloroplastic | 1144 | 3e-124 |
| Q0JEQ2 Probable L-ascorbate peroxidase 3 | 187 | 3e-013 |
| Q01MI9 Probable L-ascorbate peroxidase 3 | 184 | 7e-013 |
| Q7XZP5 L-ascorbate peroxidase 5, peroxisomal | 180 | 2e-012 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B7FJP4 Putative uncharacterized protein | 1179 | 5e-127 |
| B9H703 Predicted protein | 1178 | 6e-127 |
| C6TBZ8 Putative uncharacterized protein | 1153 | 5e-124 |
| B4FS17 Putative uncharacterized protein | 1102 | 4e-118 |
| B8ATW7 Putative uncharacterized protein | 1080 | 1e-115 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G09010.1 APX4 (ASCORBATE PEROXIDASE 4); heme binding / peroxidase | 1555 | 7e-173 |
| AT4G35970.1 APX5 (ASCORBATE PEROXIDASE 5); L-ascorbate peroxidase/ heme binding / peroxidase | 180 | 2e-013 |
| AT4G35000.1 APX3 (ASCORBATE PEROXIDASE 3); L-ascorbate peroxidase | 150 | 6e-010 |
| AT4G08390.1 SAPX (STROMAL ASCORBATE PEROXIDASE); L-ascorbate peroxidase | 147 | 1e-009 |
| AT4G08390.2 SAPX (STROMAL ASCORBATE PEROXIDASE); L-ascorbate peroxidase | 147 | 1e-009 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
