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Information for unigene UN21388

FASTA Sequence
Unigene ID: UN21388Length: 1497  SNP
GGGATTGAAAAACATTCGAAGAGCCGACAACAAAAGCAGCAACAGAGAGACCAAAGCCATGGGTCTAGAGGAAGCTGGAGATTTGG
TTCTCCACATCATCCTATCCAAAATCGGACCTGAGAACACAGCGAGAGTGGCTTGTGTCAGCAAACGCCTCAAGGTCTCCGCCTCC
GAGGACTCCCTCTGGTCCATCTTCTCTTCCCATGATCTCAACATCTCTACTCCTCTCGGTCCCCATGGAGATCCTTCTCCTTCCTT
CAAGGCGGCATATCAGTCATGGAGGGAGTCCTTTAGAATGTATCCATGGCATCTCGTCAAGCGCGTTGGACGTTGCTGGGACAACC
TCAAACGATGGTTGAGGTTAAACTTCCCTGAGGCAGAGGCAACGCTGAGGAAAGGAGCCACAGAGGAGGATCTTGAAGAGTTTGAG
TCTGCTCTCAAGGTCAAACTTCCTCTCCCCACAAGGCTTCTCTACCGTTTCGTCGATGGCCAAGAGCCTTCTTCATCCTCCAATGG
CCTTATTGGTGGCTATTCTGTGTACTCTCATGAAGTTAATGTCTACTTGCTACCTCTCAAGGAAGTTATAAGGGAGACCAACGAAA
CCATGAGCGATCTGTTCGGTATCTCTAACGGATCCAACTACATCGTTGTGGCTGCATCCGCAACGGCTAGTTTGAAATTGTTTTTC
CTAGACTGCACTGACGGACAGCTTTACACCGGGACGAGTACACGCCAGATGCTTCCTTGTGTGCCTGAATCTTTGGTTAGGTCGGT
TCATGATGTGGACGGTGATCAGCAACAGGACGCTATGCTGCTTTGGTTGGAAGAACATGGCAGGAGGTTACAGACGGGTGTTATAA
AAGTCCGTGAGGAAGAGAAGATCAAAAGTATCAGTTTGTTCCCGGAGGTTTCTCCCTTGTGTTCTGTCGCTGTAACTAACGGTGTG
CAGGTACGTGCGTCGTCTGTGTTTATCCCGGAAGTATCTAATCTTCGTGGTCAGCCACCTGCTTACTGGTATGCGTATTCCATCCG
CATGTCTCTCGTGCCAGAAGGGTGTTTCTTGAACGGGAGACACCATAGCTCTTGCCAACTGTATTGGAGGCATTGGATTATCAGAG
CAGATGATGAGGTGATAGATAAAGTCAATGGAGAAGCTGTGATAGGAAAGTACCCTCTCTTACAAGCCGAGTAAGAAGAGTTTGTG
TATGAGAGTTGTTCAAGTTTTCCAACAACTAGTGGATCCATTGAAGGATCTTTCACCTTTGTGCCTGGAAGTTTGAGAGATCCAAA
AGGGAGTCAATTCGAAGTCAAAGTGGAAGAGTTTCCTTTGAAGTTACCAGACTACATCTTCTAAACTCATCTGCCTCTCAATGTTT
TGTTACTGTTTCCTGCAGTGTGCAATGTACTTTGAGTTGAAGTGTGTTGAACAGTGACTAGTTTGTGAGAACTGATTATTCCATAA
ATAACAGTTGAAGTTGAATACACATAAATGTAGTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892320 skp1/ask-interacting protein 16 [Arabidopsis lyrata subsp. lyrata]18903e-209
NP_563759 F-box protein SKIP16 [Arabidopsis thaliana]18851e-208
XP_002271000 PREDICTED: similar to F-box-containing protein 2 [Vitis vinifera]14073e-153
XP_002450679 hypothetical protein SORBIDRAFT_05g009970 [Sorghum bicolor]10444e-111
XP_002271295 PREDICTED: similar to F-box-containing protein 2 [Vitis vinifera]8992e-094

Swiss-Prot top hits (Blast detail)Scoree value
Q9LND7 F-box protein SKIP1618855e-210
Q9UK99 F-box only protein 31741e-011
Q9DC63 F-box only protein 31732e-011
Q47AB8 Protein ApaG1283e-006

TrEMBL top hits (Blast detail)Scoree value
C5Y205 Putative uncharacterized protein Sb05g00997010443e-111
B4FTG8 Putative uncharacterized protein10318e-110
B9MY65 Predicted protein8883e-093
B9HGZ7 Predicted protein8874e-093
B9SU09 Putative uncharacterized protein8831e-092

Arabidopsis top hits (Blast detail)Scoree value
AT1G06110.1 SKIP16 (SKP1/ASK-interacting protein 16); protein binding18863e-211

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
125  24%
 
181  5%
 
218  38%
 
203  14%
 
94  19%

Unigene MembersMember information