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Information for unigene UN21397
| FASTA Sequence |
| Unigene ID: UN21397 | Length: 1088 |
SSR | | GAAAACGACAAAGGATTTCCTGAAATTATGGTTTAATCTCCCCAACAAAATGACATCATATAAAGAAAAAAAGAGACATTACAAAT
AACACGAGATCGTCCAAGTACTATAAAACGAAGAACACACTCAGCTGTATGAGTAAGAATCCATCCGTACCATACCGGAAACTATG
CCGGCCAAAGAGTGTAAACGATAAATCTCTACATTATTTTGCTTAAACGCTTCCCTCCGTAGTAAACAGGTTAAACCAACAAAAAA
ATTGCTCAAGAGAGAAACAAACGAACATGGTCTAAACCTGTTACCTTGTGCCCCACCATTCAAAGCCTCAGCTGCTACCCTTTTGT
TTGAGGGTGATTTTGTCTCCAAGACTAAGAGCAATCCCTTGCGTCTTGCTCCTTATCCTTATGTAGCCACTCAATGCTCCGTCCGT
TTGCTTCTCGATACTCACATTCACTAGAGCATCCTCACCAAACACACTTTTTGCGTATAAGTTTGCTGCAAGGAACCCACATTCTC
CGTCTAGTTCAGATGGGCCAGTGAGACACTTCATGTTTGTGGATTTGATAATGTGGTCGAGGAACTCTCTTTCGTTCTCAATCTTG
GTGTTCACAGCAACCTTGTTTTCCCATTCAAACTCTGCCCACATGGTTCTGAAAGCAAATCAAAATCATCTCAGGCAGCACCTTTC
CTCTGGAATCTGTTTTCTCAATCAGCTCCAGGTACAGCAGCAGAAGCTTTTGGATCGTGTGGTCCTCGGAAGGCAGCACGTATCGA
ATAATAGTTATGAAAAGCTGAGGATGGTTTCACCGTTCAGCAAAAGCATAACCGCCTTCTTCATGGCGTCAACTTTTGCTTCCACA
TCGTTCCCTTCTAGAGCTTCTTTAATCTCCTTGGCAACTGCTGGAGTCCCTTTGTCATAGTGTACGAGCAAGGTACTAGATTTGTC
CATCTTTTAGAGCGCTCAATATAGGAGATCCAGAGAGAGAGAGAGAGAGACGAGCAGATCCACGGAGTTCCCCAGAGATATTTTGG
ATCTCGTGAAACGTACACTCACGCAGAATCGAGTGAGATGAATATGTACTTTGTGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| CAB45907 putative protein [Arabidopsis thaliana] | 536 | 2e-052 |
| NP_194876 coatomer subunit beta-1 [Arabidopsis thaliana] | 536 | 2e-052 |
| XP_002869324 coatomer subunit beta-1 [Arabidopsis lyrata subsp. lyrata] | 536 | 2e-052 |
| NP_194877 coatomer subunit beta-2 [Arabidopsis thaliana] | 521 | 1e-050 |
| CAB45908 Beta-COP-like protein [Arabidopsis thaliana] | 521 | 1e-050 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SV21 Coatomer subunit beta-1 | 536 | 9e-054 |
| Q9SV20 Coatomer subunit beta-2 | 521 | 5e-052 |
| Q0JNK5 Coatomer subunit beta-2 | 510 | 9e-051 |
| Q53PC7 Coatomer subunit beta-1 | 508 | 2e-050 |
| P23514 Coatomer subunit beta | 382 | 6e-036 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RNM4 Coatomer subunit beta, putative | 514 | 5e-050 |
| A2WNI6 Putative uncharacterized protein | 510 | 1e-049 |
| B9N680 Predicted protein | 509 | 2e-049 |
| B8BJD1 Putative uncharacterized protein | 508 | 2e-049 |
| B9ILF4 Predicted protein | 507 | 3e-049 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G31480.1 coatomer beta subunit, putative / beta-coat protein, putative / beta-COP, putative | 537 | 6e-055 |
| AT4G31490.1 coatomer beta subunit, putative / beta-coat protein, putative / beta-COP, putative | 522 | 3e-053 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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