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Information for unigene UN21409

FASTA Sequence
Unigene ID: UN21409Length: 718 SSR 
TTTTTTGTACTGAAATTGCATTGCATTTTAGATCAAACCGGTTATAAACTGAAGTTCACTCAAACCATGTTTGGCAAGGTTTGTTC
CGAAGAAGAGTTGAAATAAGGCACTAAGAGCTACTCTCTTCGGATAGAGCAGTAATACAAAAAAAAACTGAGTAGAGTGTTCTGTG
GCTTCTTTCAAGTCGTATCATCGTGGTCTTTAACTTTCTACTGCGTTTTCAGCAGCTTCGGCCGTCTCACGTTCTTTCTCACGCTC
CTCCATGAGTTTATACATTGCCTTTTGGGTCCGCCTTTCGAGCTTGTCAAGCTTCTTCTGGACATCTCTTCGGGGGTCCCAGTTCG
GTTTCTTTGGAGCAATGTTGACAAATGGGTCCTCTTTCTTCTCCACAGCAGGTGGAAGTGCAGCGATTGGATCTTCGAATTTGGGC
AGCTCTGGTGGTGCAACTTTACTGCCCTGAAGCTCCTCAGCTTGGGGTACATAGTTTCTAAACTTCATGGCTGGACCATCTTCTTC
AACAGCAGCAGCAGCAGCAGCATCACCTTCTCCCTCTTCTTTGCTCTCAGTAAGTTCCCGAGCTGCCCTTAAAGCTCTAAGCGCCT
CTTTGCGAGCAGCTGACTTCTGCTCTATCGATTCATCTTCACCACCCATTGATATTACTTCCTGGAAGCTCCGAGCTGTAAGATTT
CTTTTTCCGGGGAAAGAATCTGTGCAACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882392 hypothetical protein ARALYDRAFT_477790 [Arabidopsis lyrata subsp. lyrata]5995e-060
NP_566245 coiled-coil domain-containing protein 12 [Arabidopsis thaliana]5923e-059
XP_002263894 PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]4964e-048
XP_002305693 predicted protein [Populus trichocarpa]4732e-045
ACU14163 unknown [Glycine max]3981e-036

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9MAB2 At3g050706083e-061
B9H295 Predicted protein4731e-045
C6SY40 Putative uncharacterized protein3987e-037
C6T3P2 Putative uncharacterized protein3987e-037
D5ADL9 Putative uncharacterized protein3583e-032

Arabidopsis top hits (Blast detail)Scoree value
AT3G05070.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf18 (InterPro:IPR013169); Has 221 Blast hits to 221 proteins in 113 species: Archae - 0; Bacteria - 0; Metazoa - 107; Fungi - 54; Plants - 17; Viruses - 9; Other Eukaryotes - 34 (source: NCBI BLink).6091e-063

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  67%
 
61  33%

Unigene MembersMember information