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Information for unigene UN21420
| FASTA Sequence |
| Unigene ID: UN21420 | Length: 1186 |
| SNP | GGGACGACCGATTGGTTTGCACTTTGCAGCGAAAGAAAACCCGTCGAAGCAAAAATCCTGTGGAAAGGGATAGATAGTAATGGGGG
ATCATCTGGTGAGAGCCGAGGAATTCGAGAAGAAGGCTGAGAAGAAGCTCAACGGATGGGGAATCTTCGGATCTAAGTACGAGGAT
GCTGCTGATCTCCTCGAGAAATCTGCTAATTCTTATAAGCTCGCCAAATCATGGGATCTAGCTGGAAAGGCTTATCTTAAACTTGC
TGATTGTCACTTAAAGTCCGACAGCAAACATGATGCTGCTAACGCTTACGCCGAAGCTGCTAAATGCTACAAGAAAGTTGACACTA
ATGAGGCTGCATCTTGTCTAGAGCGAGCAGTGGATATATTCTGCGAGATAGGAAGGCTGAATATGGCTGCCAGATACTACAAGGAA
ATTGCTGAGTATTATGAAGCTGACCAGAAGATCGACCAGGCTATTTCTTACTTTGAAAAGGCAGCTGAGTTCTTTCAAAATGAAGA
AGTGACCACCTCTGCAAACCAGTGCAATCTCAAGGTGGCACAGTATGCTGCACAGTTGGAGCAATATGAGAAGGCCATCAAGATTT
ATGAAGAGATAGCATGCCAATCTCTCAACAATAACTTGCTTAAGTATGGAGTTAAGGGACATCTTCTTAATGCTGGCATGTGCCAC
CTTTGCAAAGCTGATGTTGTTTCCATCACCAATGCGTTGGAGAAATATCAGGATCTTGATCCAACTTTTACAGGAACAAGAGAATG
CAAATTCTTATCGGACCTTGCTTCTGCTATTGATGAAGAAGACATAGCAAAGTTCACAGACGTTGTCAAGGAGTTTGATAGCATGA
CTCCTCTGGATTCATGGAAGACGACTATGTTGTTGAGGGTGAAGGAGAAGCTGAAGGCAAAGGAGCTTGAGGAAGATGATCTTACC
TAAACATATCTCTCTCTATCTAACCCAAGCTATCCCTTATTAATTACTGCTGGTTCGTATCATCACTAGTGTTAGTGTTACTTCTT
CATTCATGTTTGGTTTTATTGTGTGAGGTTTATCAGCTTCTAAGGTTGCCTGTGAGGTTTGATAAAATTGGTTTGTTTGATATCAA
AAGACTATATTTGCTGTCTCTCTCATAACTTCTCAAATCTTTGGAGATTTGCTTCAAAAGCAGTCCAC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_191178 alpha-soluble NSF attachment protein 2 [Arabidopsis thaliana] | 1441 | 3e-157 |
| BAC42980 putative alpha-soluble NSF attachment protein [Arabidopsis thaliana] | 1438 | 6e-157 |
| XP_002878072 alpha-soluble nsf attachment protein [Arabidopsis lyrata subsp. lyrata] | 1437 | 7e-157 |
| XP_002881720 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1248 | 6e-135 |
| XP_002520820 alpha-soluble nsf attachment protein, putative [Ricinus communis] | 1204 | 8e-130 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SPE6 Alpha-soluble NSF attachment protein 2 | 1441 | 1e-158 |
| P93798 Alpha-soluble NSF attachment protein | 1087 | 1e-117 |
| Q9M5P8 Alpha-soluble NSF attachment protein | 1055 | 6e-114 |
| Q54NP6 Alpha-soluble NSF attachment protein | 660 | 4e-068 |
| Q23983 Soluble NSF attachment protein | 632 | 7e-065 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q29Q46 At3g56190 | 1441 | 2e-157 |
| B9S4A1 Alpha-soluble nsf attachment protein, putative | 1204 | 5e-130 |
| D2D2Z7 Alpha-soluble NSF attachment protein | 1203 | 7e-130 |
| C6TCH2 Putative uncharacterized protein | 1180 | 3e-127 |
| B7FHQ2 Putative uncharacterized protein | 1171 | 4e-126 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G56190.1 ALPHA-SNAP2 (ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2); binding / soluble NSF attachment protein | 1442 | 7e-160 |
| AT3G56190.2 ALPHA-SNAP2 (ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2); binding / soluble NSF attachment protein | 1105 | 9e-121 |
| AT3G56450.1 ALPHA-SNAP1; binding / soluble NSF attachment protein | 596 | 9e-062 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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