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Information for unigene UN21424
| FASTA Sequence |
| Unigene ID: UN21424 | Length: 1235 |
| SNP | GAAAGCCATATTAATGATATGCATTTTCTGGCAAGCAAAACCCATTGTGTTTTTAACTCTCATCTCTTCAGTTTTTGACTGAGACA
ATTACTCATATTACATCTCAGGATATGAGTATGACACAATCATATCATCAAACACATGTTAAGAAGCAAAAGGAGAGTTAACTAGA
CAAAATCAAGATCAAAGAGGAAGTAAATGTCGCTCTTGTTCTACCATGATGATTAGGAAATTAAAAAAAAAACACAATAATATGTT
CAACGATGAAAAGGAGTGAAACAAACGAAACTTCTACTGAAAACACATCATCTCAGGATAACTTGTTCTCGAGTTTTCAAACCGCA
GGCCATTCTTTACGGATGTCGAAGCTGTAGTTGATCTCCAAGTAGCACTTATTATCATCATCAAGAAACTTAGTTCTTGCAGAATA
TGATCCTCGAGCAAACAAGCCAGAAGGAGTGGTCTCTTCCGGCATCACGTGGTTGTATGGCTCCAACTGAGGACTAAAGGTTCCAA
GCATTTCCTTTGTTCTATCCACTTTAACACCGGTCTTCCAAACAGTATTGGTGTACCTAAGACCAGAGACAATGTTGTTGTTAACG
TGAAACGTGAATTTCAAACAGTACTTGCTCCCTTCTTTCAAAGTGAACCACATTCCCTTTGGATTCCCATTCTCCGGAACCATAAG
TACAATATCTGGTCTTCCAGGGGATAAGATGGCCAGGCTAATGATCTTCACTTCAGGGTCAAGCGTCTCTCCAATGTTGGTGACAT
CAACACTTCCAAGGAGCTGTTCCTTCCACTTCCTCAAGCTCTCATCATCTTTATCCTTCTCGAGATGCTCTTTGATAGTGTACTGA
GGACCCAAATGCAATTTGGAATCGTCGTCTTCTTCTTCGTCCTCTGTAGCGCAGATAGAAGACTCGCTCATCTGCCTCCCCAAGGA
TTCAACACCCTCGTCGTCTGTGCCATCGTTGTGACGATGAGTTCTCGACGTGCTTTCGTCGTCTCCTCCCATGTCTCTGGAACTCG
ATACAGCTCCAGATACCAAAGACATCAATCAATTAAATCCCTCAAAGTCTTTGCCTTTTTTTTGGGATCTAAACGAAGAGATGAGA
GACAATGAGGAGTTGGGGAGATTGGTTCTGTGTTAACGGAAAGGAAGGAGGAGGAGGAGATGGAGTCATGTGGTGATCCGAGTTAT
AGGAGAGAGAAAGTGAACAGATCGTGGAGCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_187445 Rho GDP-dissociation inhibitor 1 [Arabidopsis thaliana] | 1050 | 6e-112 |
| XP_002882555 rho GDP-dissociation inhibitor family protein [Arabidopsis lyrata subsp. lyrata] | 1046 | 2e-111 |
| XP_002520560 Rho GDP-dissociation inhibitor, putative [Ricinus communis] | 880 | 3e-092 |
| XP_002532283 Rho GDP-dissociation inhibitor, putative [Ricinus communis] | 873 | 2e-091 |
| XP_002278188 PREDICTED: hypothetical protein [Vitis vinifera] | 848 | 2e-088 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SFC6 Rho GDP-dissociation inhibitor 1 | 1050 | 3e-113 |
| P52565 Rho GDP-dissociation inhibitor 1 | 331 | 6e-030 |
| Q4R4J0 Rho GDP-dissociation inhibitor 1 | 331 | 6e-030 |
| P19803 Rho GDP-dissociation inhibitor 1 | 330 | 8e-030 |
| Q99PT1 Rho GDP-dissociation inhibitor 1 | 329 | 1e-029 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q541X0 Putative RHO GDP-dissociation inhibitor 1 | 1050 | 4e-112 |
| B9S3J1 Rho GDP-dissociation inhibitor, putative | 880 | 2e-092 |
| B9T214 Rho GDP-dissociation inhibitor, putative | 873 | 1e-091 |
| B9HCG9 Predicted protein | 847 | 1e-088 |
| B9GTR0 Predicted protein | 844 | 3e-088 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G07880.1 Rho GDP-dissociation inhibitor family protein | 1051 | 2e-114 |
| AT1G62450.1 Rho GDP-dissociation inhibitor family protein | 772 | 4e-082 |
| AT1G12070.1 Rho GDP-dissociation inhibitor family protein | 750 | 1e-079 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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