 |
Information for unigene UN21425
| FASTA Sequence |
| Unigene ID: UN21425 | Length: 1813 |
SSR | | CTTCCTCCTCTTTGAAAAATCCAATGGCTTCTCTCTCTCTGCCTGAAGAAGCAGCTTCGTATCACCGCCGTCGCTCCAAACGCTAT
CCCTCCTCTTCCACCACCACCAACGGCGTCTCCGCCGCCGAATCTGTTCCCGACAAACGCCACAAGATCTTTCACGAATCCTCCTC
GAGTCTCATATCTCCCTCCGAGATCGAAGCAGAGTTCTCCCACCACGACCCCGCCTTCGCTCGGATCAACAACGGGAGCTTCGGCT
GCTGCCCCTCCTCCGTCATCTCCGTCCAGCGAGACTGGCAGCTCCGGTTCCTCCGCCAGCCGGATCGGTTCTTCTTCGACGACCTC
AAACCCAGCATCTCCCAGTCCAGAGCCGCCATCAGACGCCTCATCAACGCCGAGCACGACGACGAAGTCTCCCTCGTCGACAACGC
CACCACGGCGGCGGCCATCGTCCTCCAGCAGACCGCCTGGGCCTTCCGGGAGGGGCGATTCGACAGAGGCGACGCGGTGGTGATGC
TCCACTACGCCTTCGGCTCCGTCAAGAAATCGGTGGAAGCGTACGTCTCACGCTCCGGCGGGGAGGTGATCGAGGTTCAGCTCCCG
TTCCCGGTTAACTCGGCTGAGGAGATAATCAACCGGTTTAGAGCCGGTTTGGAGTTGGGTAAGGCCAACGGTACCAGGAGGGTGAG
GTTAGCGTTGATCGATCACGTGACGTCGATGCCTAGCGTTGTGATACCGATCAAGGAGCTTGTGAAGATATGTAGAGAGGAAGGCG
TTGACCAAGTGTTCGTTGACGCGGCTCACGGGATTGGTTGTGTCGACGTGGACATGAAGGAGATCGGTGCTGACTTCTACGCTAGC
AATCTCCACAAGTGGTTCTTCGCGCCGCCTTCTGTCGCTTTCTTGTATTGCAAAAGGTCCGGTGGTGGTGGTGGTAGTAATCTGCA
TCACCCGGTTGTGTCTCACGAGTACGGTAACGGTTTAGCTGTTGAGAGCACGTGGGTCGGGACTAGGGACTATAGTGCGCAGCTGG
TCGTGCCATCGATTTTGGAGTTTGTGAACCGGTTCGAAGGTGGGATTGATGGGATAAAGAAGAGGAATCATGAGTCTGTGGTTGAG
ATGGGACAGATGCTGGTTAAGTCTTGGGGGACGCAGCTAGGTTGTCCGCCTGAGATGTGTGCGAGTATGGTTATGGTTGGGTTGCC
TGTGTGCTTAGGTGTGTCGAGCGAGTCGGATGCTGTGAAGCTTAGGAACCTTTTGAGAGAGAGGTTCTGCATTGAGATCCCGACCT
ACTATAGAGCGCCTGGTGAGGGGGAGACTGATGATTCGATCACCGGGTATGTTCGCATTTCGTTTCAAGTTTATAACAAACCTGAG
GAGTATCATAGGCTTAAGGACGCAGTAAATGAACTTGTGAGAGGTGGGTTCAAATGCACGTCTCTATCTGATTGAATAAGGGTAAC
AAGCTATTTCGAGGTGGAGTAAATGAATAATGAATGCCTGGTGGAAGTTATGATGGTTTAGGTACCATGAGGATTTGGGAAGAAGT
GAAGTAGCCTATATATATGTATTTTCTAGTCAGGTCATAAAACATCTTCTCAATACAGTAATGATTGTATGAGAAGACTTTGTAAG
CATTCTTCTATTTCATTTGCTCGACATGTCTGTCTTAAAAACGTTAGCAACGTCGGTAATAAAGTAACAACGGTCACTATTTTCAG
TGTTGTTGTTGGTTCGATGTCACTGTCTTAAAAAAAATCTTTAATTTTGTGTGTACGTTTATAATGATTCTCTAATTAAATCCATT
GTTATTC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_850886 transaminase [Arabidopsis thaliana] | 2011 | 4e-223 |
| XP_002872232 transaminase [Arabidopsis lyrata subsp. lyrata] | 1969 | 3e-218 |
| XP_002329994 predicted protein [Populus trichocarpa] | 1670 | 1e-183 |
| XP_002318924 predicted protein [Populus trichocarpa] | 1666 | 4e-183 |
| XP_002512578 cysteine desulfurylase, putative [Ricinus communis] | 1609 | 1e-176 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q17RH7 Putative protein TPRXL | 183 | 1e-012 |
| P87179 Cell wall integrity and stress response component 1 | 152 | 6e-009 |
| Q75JC9 Uncharacterized protein DDB_G0271670 | 152 | 6e-009 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q3E6S9 Putative uncharacterized protein At5g26600 | 2011 | 2e-223 |
| B9N414 Predicted protein | 1670 | 9e-184 |
| B9I6C7 Predicted protein | 1666 | 3e-183 |
| B9RFQ9 Cysteine desulfurylase, putative | 1609 | 1e-176 |
| B8A6R6 Putative uncharacterized protein | 1437 | 9e-157 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
