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Information for unigene UN21431
| FASTA Sequence |
| Unigene ID: UN21431 | Length: 1224 |
| SNP | GCAAGAGGGACAGGAATCGGTGGAGGGAATGATGAGAGGGAACAGACTTTGAACCAGTTGCTAACTGAGATGGATGGGTTTGAAGG
TAACACTGGTATCATCGTTGTTGCTGCAACCAATAGAGCAGACATTCTTGACTCTGCTTTGTTGAGGCCAGGACGGTTTGATCGGC
AGGTAAGTGTTGACGTTCCGGACATCAAGGGGAGAACAGATATCCTCAAGGTTCATGCTGGTAATAAGAAGTTTGAAAATGACGTC
TCGCTTGAAGTGATAGCAATGAGAACACCTGGATTTAGCGGAGCAGATCTTGCTAACCTCTTGAATGAAGCTGCTATATTGGCTGG
ACGACGTGCAAAGACGGCGATATCATCGAAAGAGATTGATGACTCTATTGACAGAATCGTTGCTGGTATGGAAGGAACTGTGATGA
CTGATAGCAAGAGCAAAAGCTTGGTTGCTTACCATGAAGTTGGTCATGCCGTGTGTGGAACATTGACTCCAGGACATGACGCTGTG
CAAAAGGTAACGTTGGTACCAAGAGGACAAGCGAGAGGTCTGACTTGGTTCATTCCATCAGATGACCCTACTCTCATCTCCAAGCA
ACAACTCTTTGCAAGAATAGTTGGTGGACTCGGTGGTAGAGCCGCTGAAGAAATCATCTTTGGTGAGCCTGAGGTTACTACTGGAG
CCGTTGGTGACTTGCAACAGATCACCGGTTTGGCTAAGCAGATGGTAACAACATTTGGAATGTCTGAAATTGGACCATGGTCGTTG
ATGGATTCATCGGCGCAAAGCGATGTGATCATGAGGATGATGGCAAGAAACTCCATGTCCGAGAAGCTCGCAGAGGACATTGACTC
TGCGGTGAAGAAACTGTCAGACAGTGCATACGAGATAGCTTTAAGCCACATAAGGAACAACCGTGAAGCCATGGATAAGATAGTTG
AAGTGCTTCTGGAGAAAGAAACTATCGGAGGCGACGAGTTCCGAGCAATTCTCTCCGAGTTCACTGAGATCCCGCCGGAAAACCGA
GTTCCTGCCTCAATCCCAACATCTACACCAACGCCAGCTTCTGTCTAGGTAATGAATCTGTATACTTCCGATTTTTCTGTACATTT
GTACTGTCAAAACTTGAGCTCTAGAAATATGTGGTGATGTCCCAATACTGTGTAACACAAGTAAATGTTATAAGTGGAATTGGTAT
ATTCACCAATGCTTTGTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ33965 unnamed protein product [Thellungiella halophila] | 1740 | 6e-192 |
| XP_002879294 hypothetical protein ARALYDRAFT_482018 [Arabidopsis lyrata subsp. lyrata] | 1736 | 2e-191 |
| NP_850156 cell division protease ftsH-2 [Arabidopsis thaliana] | 1719 | 2e-189 |
| BAH20277 AT2G30950 [Arabidopsis thaliana] | 1719 | 2e-189 |
| BAH20304 AT2G30950 [Arabidopsis thaliana] | 1719 | 2e-189 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O80860 Cell division protease ftsH homolog 2, chloroplastic | 1719 | 7e-191 |
| Q8W585 Cell division protease ftsH homolog 8, chloroplastic | 1686 | 4e-187 |
| Q655S1 Cell division protease ftsH homolog 2, chloroplastic | 1620 | 2e-179 |
| Q1PDW5 Cell division protease ftsH homolog 6, chloroplastic | 1394 | 3e-153 |
| Q67WJ2 Cell division protease ftsH homolog 6, chloroplastic | 1290 | 4e-141 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DHR0 AT2G30950 protein | 1719 | 1e-189 |
| B9DHT7 AT2G30950 protein (Fragment) | 1719 | 1e-189 |
| B9S304 Cell division protein ftsH, putative | 1648 | 2e-181 |
| A5AER7 Putative uncharacterized protein | 1646 | 3e-181 |
| Q9ZP50 FtsH-like protein Pftf | 1640 | 2e-180 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G30950.1 VAR2 (VARIEGATED 2); ATP-dependent peptidase/ ATPase/ metallopeptidase/ zinc ion binding | 1720 | 5e-192 |
| AT1G06430.1 FTSH8; ATP-dependent peptidase/ ATPase/ metallopeptidase/ zinc ion binding | 1687 | 3e-188 |
| AT5G15250.1 FTSH6 (FTSH PROTEASE 6); ATP-dependent peptidase/ ATPase/ metallopeptidase/ peptidase/ zinc ion binding | 1394 | 3e-154 |
| AT5G42270.1 VAR1 (VARIEGATED 1); ATP-dependent peptidase/ ATPase/ metallopeptidase | 827 | 2e-088 |
| AT1G50250.1 FTSH1 (FtsH protease 1); ATP-dependent peptidase/ ATPase/ metallopeptidase | 824 | 4e-088 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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