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Information for unigene UN21443
| FASTA Sequence |
| Unigene ID: UN21443 | Length: 1093 |
| SNP | GGACATTCACAGTGAAAAATCACATTTTATAATAACGATCGATTCTCTACATCATTCAAAGCACATAGCATACTTAAAAAAAGCAC
AAAAACACACACATTTTACACAATGCATTATCACAGTGATTACAAAAACCAAAGCAGAGCAGAGCCTGATGAATTTCCCAAGAAGG
GAAAGGTGAGAAAGAGAATGTAAAGTCTTACTTGAAACAAGAAGGAAGACTTGGCCCGTGGCAAACAAAGGCCATCGCGACGTATA
CAACCACTGCGAGTATAAGTATCAGTGCTATCGTAAGCTTGACATTTCTCCACCACATGACGCTTCTAAAACGGCGAGCTTGCTTC
CTGAAACGAAAAGTGTTCCCTTGCATGTTTGCTGTTTTATCCACAAGCAACTCCAAACGCTCCCCTCTATCCAAGACTTTATCTAT
ATTCTCAATCATCACGTTTCTAACCTGAGACATTTCACATTTAATTCTGCTAACCCTGTCAGCATTAGGATCGTTGGAATAGTATT
CCATCTGCTGACTCAAAACCCTTGAAAACTCATCGTTCATGGAGTAAGCTTGAGCAGAGTGAATGGCACGGCCGTAACTTCTCACA
AATCTCTGATGTATCTCTTCCAGAAACCCAAACGGAATACTCCTTCCGGCGGTTTCATCGGCCATACAGAGGGCGGTAAGACCATC
GGTACGCTTGACGTGGAAGACGTACCGATCCTGAGAGTAGGACACGTGGCTATCCACGTCTTCTTCACCCGGCAGCTTCTCCAGAA
TCTGCTTCGCGATTGAGCTCGCGTTGGTTGATGTTGCGCTGAACTCCGATAACACCACCGATCCACGCGCCACCAACGCATATAAG
ATCGCCATCTATCTCCTCCGACTCGCAAAATCTCAGAAGGGTTCAACACCGACTTGCAAAATCAAAGAGTGTCTCCCTCCTCTCCT
TGGTAATCAATTAATAATGATTTTAGAGATGGTAAAGTCTTATCTGAAGCCCGCTTTACAGTGACCACTTTTTGAATTTTGAATAT
TTTTAGGCACAACCAACATATCTGGCCTCTTTTTGAACCTCTTGGGCGTTTAGCCCAATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_196676 vesicle-associated membrane protein 713 [Arabidopsis thaliana] | 1018 | 3e-108 |
| XP_002873497 ATVAMP713 [Arabidopsis lyrata subsp. lyrata] | 1014 | 7e-108 |
| XP_002515492 Vesicle-associated membrane protein, putative [Ricinus communis] | 967 | 2e-102 |
| XP_002285207 PREDICTED: hypothetical protein [Vitis vinifera] | 958 | 2e-101 |
| XP_002867255 vesicle-associated membrane protein 7C [Arabidopsis lyrata subsp. lyrata] | 951 | 1e-100 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LFP1 Vesicle-associated membrane protein 713 | 1023 | 3e-110 |
| O49377 Vesicle-associated membrane protein 711 | 951 | 7e-102 |
| Q9SIQ9 Vesicle-associated membrane protein 712 | 932 | 1e-099 |
| Q9FMR5 Vesicle-associated membrane protein 714 | 659 | 5e-068 |
| Q86AQ7 Vesicle-associated membrane protein 7B | 464 | 2e-045 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RP23 Vesicle-associated membrane protein, putative | 967 | 1e-102 |
| A9P9E7 Predicted protein | 943 | 9e-100 |
| Q0WWE7 Vesicle-associated membrane protein 7C | 942 | 1e-099 |
| A9PGC9 Predicted protein | 922 | 2e-097 |
| C5Z5C0 Putative uncharacterized protein Sb10g005060 | 850 | 5e-089 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G11150.1 ATVAMP713 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 713) | 1024 | 2e-111 |
| AT4G32150.1 ATVAMP711 (ARABIDOPSIS THALIANA VESICLE-ASSOCIATED MEMBRANE PROTEIN 711) | 951 | 6e-103 |
| AT2G25340.1 ATVAMP712 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 712) | 932 | 9e-101 |
| AT5G22360.1 ATVAMP714 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 714) | 664 | 1e-069 |
| AT1G04750.1 VAMP721 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 721) | 400 | 5e-039 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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