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Information for unigene UN21445
| FASTA Sequence |
| Unigene ID: UN21445 | Length: 1098 |
| SNP | GCAAAAGTGTGACTATTAGTCACATTAAAAGCACTGGACTTTTACATTTATTCTCAGAGTACTACTTACATTCAAAAACACTCGCG
AACATCCTTTTAAACACAACATAGAAAAGAAAGAAGAAAAGAACTACTATTATTATCCATAAAGACCTCGCTATAAAAAAGATAGA
ACAGTGCCGTATAGCACAAGGAAAACATTATCACCAAATCAGAATCATCAAGAGCTGCATGCAACATTCCTTCCTTTAACCCTCAA
TGCAGAACCTCTTGGTCATCCAGAAGCATTTGGTCAAAATGCCACACCCCATGACCCTTTCCAATTCTTCTTAGCTGGGCAACATA
CTCTGAGATTTTCTTGATAGCTTCGACCTGCTCTCCTAGAAACTCAGATTCGACAAAATCAACCAGCTGAACATCGTTGTTTTTCA
CACCCACACTTTGCAACTTGAGAAGCTTCTCATTTGTAAGTTTCTCCAAAGACAGTGCAAGCTCCATAGCATACAATGCATCTCCT
TTCTCCTCGTGATCAAACTCAGAGAAGGGCATCAAAATAGACTGCAGCTTCACTCTCCCACCTCGCTTGTTCTGGTACTCCATAAA
CTTCTCAGCGTGACCTCGTTCTTCAACAGACGAATCTTTGAAGAAATTGGCGAAACCTTTCAAACCAACATTATCTCTGTCAAAGT
AGGCATACAGGGCGTGATAGATGTAGGAGACATTATACTCCACATTGATCTGTTCGTTAATCGCAGCTTCAGATTCGTCCGAGAAT
CTGTGGCGGGCGAGAGAAACCAGAGGAGTTGTGGGAACGAGCAGATCCATTTCTTTCTTCACTTCCTCAAAAGGCTCGAACACAAC
TCCGGTCAACGACTTGGTGCTCGTTCCTTTCGCCGCCCGAACAGACAACCTTGATCCACGGCAAGCGGTCGAAGGAAACAGAACAC
TCGACGGAGGAAAGAGATCTCCAACGCCGCCGGTGCTCAAGATAGAAAGTGCGGGAGAAGCCTTAAGCAACATCTTGAGTAATTCT
TAACAAAGATCTAGAGAGAGAGTATGGGAAGATGGAAAGTTATATGTAAAATGTCGGAGCTAGCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882711 ATFER2 [Arabidopsis lyrata subsp. lyrata] | 1074 | 8e-115 |
| NP_187716 ferritin 2 [Arabidopsis thaliana] | 1071 | 2e-114 |
| AAM65872 ferritin subunit, putative [Arabidopsis thaliana] | 1069 | 3e-114 |
| XP_002862448 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1025 | 4e-109 |
| BAD43342 putative ferritin subunit precursor [Arabidopsis thaliana] | 999 | 4e-106 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SRL5 Ferritin-2, chloroplastic | 1071 | 8e-116 |
| Q8H1T3 Ferritin-2, chloroplastic | 910 | 4e-097 |
| Q948P6 Ferritin-3, chloroplastic | 885 | 3e-094 |
| Q41709 Ferritin-2, chloroplastic | 873 | 7e-093 |
| Q948P5 Ferritin-4, chloroplastic | 860 | 2e-091 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G11050.1 ATFER2 (ferritin 2); binding / ferric iron binding / oxidoreductase/ transition metal ion binding | 1071 | 7e-117 |
| AT2G40300.1 ATFER4 (ferritin 4); binding / ferric iron binding / oxidoreductase/ transition metal ion binding | 840 | 4e-090 |
| AT3G56090.1 ATFER3 (ferritin 3); binding / ferric iron binding / oxidoreductase/ transition metal ion binding | 819 | 1e-087 |
| AT5G01600.1 ATFER1; ferric iron binding / iron ion binding | 813 | 6e-087 |
| AT3G61010.1 glycosyl hydrolase family protein 85 | 218 | 6e-018 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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