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Information for unigene UN21448

FASTA Sequence
Unigene ID: UN21448Length: 1258 SSR 
GGACACCAGCATAAGAAGAAAGAAGAACAATTGAAGAAAGCAAGCAGGAACATAGATTCTTTCTTGTCCTTTCAGTGAGGTTTTTG
GTTTTAAGAATCGATTGATTGATTGATTTAGAAGGATGACGAGTTCTGCCGAGTGTTGGGAATTGTCGGGTGAGAGGAAGAGGGTG
CTTGAGAAGAAGCCGAGCTTCTCGCAAACATGTAGTCGATTGAGTCGTTATCTGAAGGAGAAGGGTAGCTTCGGAGATCTCAGCTT
AGGGTTGACATGCAACCCCGACCTTAATGGAGCTTTTGGTGTGTCACGTGAGCCCACGATGATGAATCTCTTCCCTTCTACGGCTG
CTCAAGACGTTAAACCGAAGAGTGATGTGATTCCTCGCCAATCAAGCTTTTCTTCTTCCTCGTCCCCTGGTGGAGTCAAGGAAGAA
GTCGATAAGATCATGGATACTAAATCTGTGAAGGTGGAGTCTCAATCTGCGCCATTGACCATATTCTACGGCGGTCAAGTTATGGT
GTTTGATGATTTTCCTGCTGAGAAAGCCAAGCAAGTCATTGACTTGGCTCACAAAGCAAGTGCTAAAAGCTTCACATCTGAGCTGA
ACAGTGACCAGAGTGCTTATACTCAAAACATCATAGCCAAGAATCATAAAGAGATTGCTTCCACTACCCCAAATCCAGTTCCTAGT
CCTGTGAAAACCGCTGCACCAGAGCCAATCCAAGCCAACAAGTCCTCTTTAGCTTGCGGTAACGAACTCCCAATTGCTAGAAGAGC
TTCACTTCATCGATTCCTCGAGAAGAGAAAGGATAGGATTTCATCAAAGGCACCGTACCAGATAGACGGTTCTACCGAAGCATCTT
CCAAGCCAAACACATCTTGGCTCGGTTCCCAGTAATCTCTTTGAGTTGAGACTCCTTTTGATGATGCTCCCATCGTTTACTATAAT
ATCAAGAAGCTCTACTGATTTCACTCCTAGGAGTTTTGTTGTCTGTTCAATGCGCCAGAAAAAAAACTCAGTATATCTGTACGAAA
CTAATCCCTTATAGTTTTGCTACTTTTTTTTGGGTTTAAAGCCATTGTGTTATAGACCTTTTCATCTGCTGTTCTCAGCATTTGCT
TGCAACTTTTGTAAGAAACATCAGTTTCTTATTTATTTATTTTTGGTTGTTGTTGTTGTTGACGACCTTAATATCAGCTTACTTTA
ATTATCCAAGTGTGTCTTTCTTTTCTTATTTATTGAGAGAGCTGAAGCTTCCAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33919 unnamed protein product [Thellungiella halophila]8956e-094
XP_002889001 hypothetical protein ARALYDRAFT_476633 [Arabidopsis lyrata subsp. lyrata]8822e-092
NP_565096 protein TIFY 10B [Arabidopsis thaliana]8087e-084
AAM64554 unknown [Arabidopsis thaliana]7998e-083
NP_564075 protein TIFY 10A [Arabidopsis thaliana]6269e-063

Swiss-Prot top hits (Blast detail)Scoree value
Q9S7M2 Protein TIFY 10B8083e-085
Q9LMA8 Protein TIFY 10A6264e-064
Q9C9E3 Protein TIFY 11B2205e-017

TrEMBL top hits (Blast detail)Scoree value
C6TEN6 Putative uncharacterized protein4251e-039
A9PIL0 Putative uncharacterized protein4133e-038
C6TAX9 Putative uncharacterized protein3954e-036
A5C160 Putative uncharacterized protein3892e-035
B8LFH2 PnFL-23552e-031

Arabidopsis top hits (Blast detail)Scoree value
AT1G74950.1 TIFY10B8092e-086
AT1G19180.1 JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1); protein binding6327e-066
AT1G19180.2 JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1); protein binding2322e-019
AT1G72450.1 JAZ6 (JASMONATE-ZIM-DOMAIN PROTEIN 6)2204e-018
AT3G17860.1 JAZ3 (JASMONATE-ZIM-DOMAIN PROTEIN 3)1192e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
77  88%
 
81  13%

Unigene MembersMember information