 |
Information for unigene UN21449
| FASTA Sequence |
| Unigene ID: UN21449 | Length: 1017 |
| SNP | GATTAAATAGAATTTTCTCTTATCAATCAGAAAACAATTGTCTCGTCGCTTTTAGTCCTACATGCAAATGATATCACACCGCTCGG
AACAGCACGCCGGTTTTATTTGATAAACCGGCAAGGCGTGTGAAGACAACAGACGCTATAAAACGGAACGTACTTCAGCAAAAACA
AACTGTGAACTGCAAACAGTGCAAAATAAAAGAGTACAAATCATTCCTCACATCAAAGGTTCTGAGCAAAGAAAGCATTCTTAAAC
GATTAATTTTTTTTATCATTATGATATAGCCAGTTTCTCAAGAACAAGACTTTTCAGAACGCTCTGATTCTCGAACGCAGCGAAAA
GAAGATGTAAACCGGGTTGTGTCTTGACAGTTCGATGGAAACTCTCTTTAGAGCTGTGAAGTTAAAATTTGATCAGAACATTTCTT
GAGACTTTCTGACACAGCGGCTCACTTTCTTCTTGAACTCGTCTCTCTTCTCTCGCCACTCTTTAGCAGCTTCAACGTTTGCTGGG
GATTCATCGTTGGGACCAGAGAGCATAGATATAATACTCAACATAATACTTTCAACAGTATGAACAGGGGTCCAGCGCTCGCTAGC
AAGCTCATAACCGCTTGGATCATCACCGGGAGGGTGAAGAATAGATATGCAAACACGACCATCAGAATAAACATTAGGATGCCACA
TATCTGAAGTAAACCTCACGCTTGGTGGGCTATTAGGATAGTTCTGCGGGAAGGTCATGATAGCGTTAAAGAATCCTCCTTCATAG
AGAGTATCTGGAGGTCCGATAATGGTAACGCTCCACTCGAATATATTCTTCTCGTCGACGAGTCCAGCAGAGAATCCATCAACAGG
ATGCTTACAGAGATCTTTGAGTTGTTTCTGAAGGAGAAGGCTAGCTTGCGATGCCATGGCTGATGGATGATGATGATAGAGAGGAT
CGAGATTGAGATTTTATATATCGATTACAAGAAGGTTCTGGTTCTGGTTCTGAAGATGGAACTTGGGTTGT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAL86003 putative E2, ubiquitin-conjugating enzyme UBC7 [Arabidopsis thaliana] | 890 | 2e-093 |
| NP_568902 ubiquitin carrier protein 7 [Arabidopsis thaliana] | 890 | 2e-093 |
| Q42540 RecName: Full=Ubiquitin-conjugating enzyme E2 7; AltName: Full=Ubiquitin carrier protein 7; AltName: Full=Ubiquitin-protein ligase 7 | 885 | 6e-093 |
| XP_002866325 ubiquitin-conjugating enzyme E2 7 [Arabidopsis lyrata subsp. lyrata] | 879 | 3e-092 |
| NP_566884 ubiquitin-conjugating enzyme E2 13 [Arabidopsis thaliana] | 856 | 1e-089 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q42540 Ubiquitin-conjugating enzyme E2 7 | 885 | 3e-094 |
| Q42541 Ubiquitin-conjugating enzyme E2 13 | 856 | 6e-091 |
| P42747 Ubiquitin-conjugating enzyme E2 14 | 790 | 3e-083 |
| P25868 Ubiquitin-conjugating enzyme E2 7 | 673 | 1e-069 |
| Q9Y818 Ubiquitin-conjugating enzyme E2 15 | 592 | 2e-060 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C6T1V1 Ubiquitin carrier protein | 828 | 2e-086 |
| C6SWR4 Ubiquitin carrier protein | 821 | 1e-085 |
| Q06H22 Ubiquitin carrier protein | 820 | 1e-085 |
| C6SXY4 Ubiquitin carrier protein | 816 | 4e-085 |
| Q2XTC0 Ubiquitin carrier protein | 812 | 1e-084 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G46460.1 UBC13 (ubiquitin-conjugating enzyme 13); ubiquitin-protein ligase | 857 | 4e-092 |
| AT3G55380.1 UBC14 (ubiquitin-conjugating enzyme 14); ubiquitin-protein ligase | 791 | 2e-084 |
| AT5G59300.1 UBC7 (UBIQUITIN CARRIER PROTEIN 7); protein binding / ubiquitin-protein ligase | 750 | 1e-079 |
| AT1G64230.1 ubiquitin-conjugating enzyme, putative | 206 | 1e-016 |
| AT1G64230.2 ubiquitin-conjugating enzyme, putative | 206 | 1e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
