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Information for unigene UN21454

FASTA Sequence
Unigene ID: UN21454Length: 595  SNP
AACCAATATTGCAAATGATCATAACTAAACTTCAAACCAAAGTTCATAAACCATCCAAAACATGTTCCACATTCATTCTCGAAACT
ACATAAGCATACTGTAAATTCCATTACAAAACGATTAATAATAAAAAACAGAAACGACAAAATGGCTTCTTCAAAACCTGAGCTTG
GTAAAGAACCACCTGTTCTTCCCGGTCTTGAACCTCTCCTCGAGCTTAGCCTTAGCCTCCTTAAGAGCCGCCACCTTCTTGTCCTT
CGACGCCAGAGCTTCCAGAGTCGCAACCTCCTTCAGATCCACGTCCAACGTGTAACGAGTAGGCATCAGATGCTGGTAGTTCACGA
CCTTGATGAAGCACTTGACTCTAGATTTCTTCGCCGTCTTCTTGGCCGAGTCCTTGCGGATGACCTTGCTCGGATACTTCTTGAGT
CCCGCGACGAGGCAGTGTCCGTAAGGACGCTCGCGGTTTCCGTCGTCGAAGGATCGGATGATCACTGCCTTCTTGCCGGCGTAACG
GCCTTGGAGGAGGATCACCGCTTTGTTCTGCTTCAGGAACTTAACCATGGCTGCTGCTCTCTCTTCCGGCGAGAAAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_193236 60S ribosomal protein L27-3 [Arabidopsis thaliana]6702e-068
XP_002870267 60S ribosomal protein L27 [Arabidopsis lyrata subsp. lyrata]6567e-067
NP_188862 60S ribosomal protein L27-2 [Arabidopsis thaliana]6451e-065
AAM63601 ribosomal protein L27, putative [Arabidopsis thaliana]6442e-065
XP_002300063 predicted protein [Populus trichocarpa]6056e-061

Swiss-Prot top hits (Blast detail)Scoree value
P51419 60S ribosomal protein L27-36709e-070
Q8LCL3 60S ribosomal protein L27-26457e-067
Q05462 60S ribosomal protein L275902e-060
Q9SKX8 60S ribosomal protein L27-15874e-060
P41101 60S ribosomal protein L275131e-051

TrEMBL top hits (Blast detail)Scoree value
Q0WRB8 60S ribosomal protein L276701e-068
A9P8D7 60S ribosomal protein L276054e-061
A9PAT1 60S ribosomal protein L276037e-061
A8MS28 Uncharacterized protein At4g15000.26002e-060
B9HD67 60S ribosomal protein L276002e-060

Arabidopsis top hits (Blast detail)Scoree value
AT4G15000.1 60S ribosomal protein L27 (RPL27C)6717e-071
AT3G22230.1 60S ribosomal protein L27 (RPL27B)6465e-068
AT4G15000.2 60S ribosomal protein L27 (RPL27C)6001e-062
AT2G32220.1 60S ribosomal protein L27 (RPL27A)5883e-061

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
191  11%
 
71  11%
 
63  33%
 
82  22%
 
102  22%

Unigene MembersMember information