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Information for unigene UN21455

FASTA Sequence
Unigene ID: UN21455Length: 590  SNP
CGCAAACCAAATAAGTTTCGAATTATGGTTTCAAATGTACCAAATCAGTTTGTAGATTCGATACGAGGCAGTAACGTGATATAACA
AAACGGACCAAACTGTATTAATGTCGAAAATGGCAAAACTGAAAATCTCAAATAAACTAGAGCAATAGAACATAGCAAGTGTATAA
CAGGGAGACCAAACTAATCGAACAAGCCGAATCCAAGATCTCCATCGCTCTCTTCCGCTGGTTCATCCTTCTTCTCCTCCTTTGCA
GGGGCAGCAGCTGCGGCTCCTCCAGCAGCAGCGGGTGCGGCGGCAGCAACAGGTGCACCACCACCACCGCCACCAGCACCAACGTT
CATGATGAGGTCAGTGACGTTACGCTTCTCAGCCATCTTGGCGAATAGCATTGGCCAGTATGACTCAATCTCCACACCAGAGGCTT
TCACGATAGTCGCAATCTTGTCGGAAGTGATGGCAATGCCCTCGTCTTCAAGGATCATAACAGCGTAGCTGCAAGCGAGTTCTCCG
ACTGTCGACATTGTCTCTCAGACTGCGATGAGAAGTGGCGCCGCTTGAACACACAGATTAGGGTTTTGCGATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_567190 60S acidic ribosomal protein P1-2 [Arabidopsis thaliana]5591e-055
XP_002872927 hypothetical protein ARALYDRAFT_490484 [Arabidopsis lyrata subsp. lyrata]5492e-054
AAB62855 similar to acidic ribosomal protein p1 [Arabidopsis thaliana]5161e-050
XP_002889384 hypothetical protein ARALYDRAFT_311324 [Arabidopsis lyrata subsp. lyrata]5142e-050
NP_199581 60S acidic ribosomal protein P1-3 [Arabidopsis thaliana]5133e-050

Swiss-Prot top hits (Blast detail)Scoree value
O23095 60S acidic ribosomal protein P1-25597e-057
Q8LEQ0 60S acidic ribosomal protein P1-35131e-051
Q8LCW9 60S acidic ribosomal protein P1-15112e-051
P52855 60S acidic ribosomal protein P13804e-036
P91913 60S acidic ribosomal protein P13096e-028

TrEMBL top hits (Blast detail)Scoree value
B9DFS7 AT4G00810 protein5599e-056
B9RNK0 60S acidic ribosomal protein P1, putative4154e-039
Q307Z7 Acidic ribosomal protein P1a-like3984e-037
A9NR17 Putative uncharacterized protein3743e-034
A9NNL8 Putative uncharacterized protein3724e-034

Arabidopsis top hits (Blast detail)Scoree value
AT4G00810.1 60S acidic ribosomal protein P1 (RPP1B)5605e-058
AT4G00810.2 60S acidic ribosomal protein P1 (RPP1B)5605e-058
AT5G47700.1 60S acidic ribosomal protein P1 (RPP1C)5141e-052
AT5G47700.2 60S acidic ribosomal protein P1 (RPP1C)5141e-052
AT1G01100.1 60S acidic ribosomal protein P1 (RPP1A)5122e-052

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
201  13%
 
71  13%
 
62  25%
 
92  25%
 
112  25%

Unigene MembersMember information