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Information for unigene UN21466
| FASTA Sequence |
| Unigene ID: UN21466 | Length: 1086 |
| SNP | GGCCCAGCTTTACACAATTTTGGAACTTTGTCGAGCATTTGATCGTGTCTTTAAGGAGCACTTGGATGGAGGACGACCTGGTGGAG
ACCGGATTTATGGAGTTTTTGACCATCAGTTACCAGCAGCCTTAAAGAAACTTCCCTTTGATAGACATCTCTCTACCAAAAATGTT
CAGAAAGTTGTCTCAGAAGCAGATGGTTATCAGCCACATCTTATTGCTCCTGAACAAGGATACAGAAGGCTCATTGATGGATCCTT
TAGCTATTTCAAAGGACCAGCTGAAGCGACTGTCGATGCAGTGCATTTTGTATTGAAAGAGCTGGTCAGAAAGTCGATTTCAGAAA
CAGAGGAGCTGAAGCGATTCCCAACTCTAGCAAGCGATATAGCAGCAGCTGCAAATGAAGCTCTTGAAAGATTCAGAGACGAAAGC
AGGAAAACAGTTCTGCGTCTGGTGGACATGGAATCCAGCTACCTCACTGTTGAGTTCTTCAGGAAACTTCACCTTGAACCCGAGAA
AGAGAAACCAAACCCGAGGAATGCCCCACAGCCAAACGCAGACATATACTCCGATAGTCACTTCAGAAAGATCGGATCCAACGTGA
GTGCATACATAAACATGGTTTGCGACACATTGAGAATCTCTCTTCCAAAAGCTGTTGTTTACTGCCAAGTTAGAGAAGCAAAGAGA
TCGCTCCTCAACTTCTTCTACGCTCAAGTCGGCAGGAAAGAGAAGGAAAAGCTGGGGGCGATGTTGGACGAAGACCCACAGCTGAT
GGAAAGAAGAGGAACCTTAGCCAAAAGGCTCGAGCTCTACAAACAAGCTAGAGATGACATCGATGCCGTGGCTTGGAAGTAAGGTG
TGAAAAAAGGGTTTCCTAAGAAATATTCTTTATATCTTTAATTGCTTTGCTAGTGTGGGCACTTATGTTGGAAGTTGTAACCTCCA
ATCCATTGCTGCACACACATACACACTATTACTCGTATTTTCTTCTGCCGCTAATATTTGTTTCCCACTTTTTGGTTTGTATCTTC
GATTATTGAATACTGTTTTAGAACGGTTGAGTCATATTTTGATGAAGTTCGCAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_172936 dynamin-related protein 1C [Arabidopsis thaliana] | 1432 | 2e-156 |
| AAF22293 dynamin-like protein 5 [Arabidopsis thaliana] | 1432 | 2e-156 |
| AAL92170 dynamin-like protein C [Arabidopsis thaliana] | 1432 | 2e-156 |
| XP_002892832 hypothetical protein ARALYDRAFT_888870 [Arabidopsis lyrata subsp. lyrata] | 1432 | 2e-156 |
| AAM61645 dynamin, putative [Arabidopsis thaliana] | 1427 | 9e-156 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8LF21 Dynamin-related protein 1C | 1432 | 1e-157 |
| Q9FNX5 Dynamin-related protein 1E | 1087 | 1e-117 |
| Q8S3C9 Dynamin-related protein 1D | 1004 | 5e-108 |
| Q39828 Dynamin-related protein 5A | 895 | 2e-095 |
| Q84XF3 Dynamin-related protein 1B | 892 | 4e-095 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9HVU8 Predicted protein | 1297 | 8e-141 |
| B9T4N0 Dynamin, putative | 1276 | 2e-138 |
| A5BYE1 Putative uncharacterized protein | 1169 | 5e-126 |
| B9SKH8 Dynamin, putative | 1125 | 7e-121 |
| C0PHK6 Putative uncharacterized protein | 1117 | 6e-120 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G14830.1 ADL1C (ARABIDOPSIS DYNAMIN-LIKE PROTEIN 1C); GTP binding / GTPase | 1433 | 7e-159 |
| AT3G60190.1 ADL1E (ARABIDOPSIS DYNAMIN-LIKE 1E); GTP binding / GTPase | 1087 | 1e-118 |
| AT2G44590.2 ADL1D (ARABIDOPSIS DYNAMIN-RELATED PROTEIN 1D); GTP binding / GTPase | 1004 | 4e-109 |
| AT2G44590.3 ADL1D (ARABIDOPSIS DYNAMIN-RELATED PROTEIN 1D); GTP binding / GTPase | 1004 | 4e-109 |
| AT2G44590.1 ADL1D (ARABIDOPSIS DYNAMIN-RELATED PROTEIN 1D); GTP binding / GTPase | 995 | 5e-108 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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