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Information for unigene UN21483

FASTA Sequence
Unigene ID: UN21483Length: 708  SNP
ATTCTCGTAACAATTTATCATTTCGTGGTCATCTCTCTAATCACACAAAAACAAAAATGGGTCGCCGTAGCTCAGGAGGAAGATCT
GCACCTCGTCCCCGTCCTGCTGCTGCACGCAGCCCCCCTCCTCAAACTGTAAACCGTGCACCTCCTCCAGCACCAGCAGCTCAGGC
TAGCGGTGGCGGTGGCATGCTTTCAGGCATCGGTTCAACTATCGCTCAGGGTATGGCTTTTGGTACCGGAAGCGCTGTTGCGCATA
GGGCTGTTGATGCTGTGATGGGCCCACGAACCATTCAGCATGAAGGTGTTGAGACCGCCTCTGCTTCTGCTGCTCCTGCTGCAGGC
AACGTGTTTTCCAGCTCCTGTGACCTTCATGCTAAGGCTTTCCAAGATTGCGTCAGCAGCTATGGAAGCGATATTAGCAAGTGCCA
GTTTTACATGGACATGTTGTCTGAGTGCAGGAAGAACTCCGCCTCCACTATTGGTGCCTGATCAAGAAGGCTCATCATGCTTCTTC
TTTTCTTTTATTTGCCTTTTTCTTCTTTTATCTAAGAAACTATTCAGCTGTGAATGCTGAGAATTTGGATGCCCTCAAGCCAACCA
TACTTTATTTCCAGAACCATAATTTGAATTTGGGTTATTTTCCCATTTCTTAATCGAATAATGCATTATGGATGGGTAATAGACTA
ATAACTAAGCTTTCTCGATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_201245 uncharacterized protein [Arabidopsis thaliana]6372e-064
XP_002864899 hypothetical protein ARALYDRAFT_496648 [Arabidopsis lyrata subsp. lyrata]6301e-063
XP_002298508 predicted protein [Populus trichocarpa]5394e-053
XP_002313962 predicted protein [Populus trichocarpa]5288e-052
XP_002532758 conserved hypothetical protein [Ricinus communis]5224e-051

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9FME9 Emb|CAB89373.16371e-064
A9PDV5 Predicted protein5393e-053
A9PAP4 Predicted protein5285e-052
B9T3D9 Putative uncharacterized protein5223e-051
Q2V2V7 Putative uncharacterized protein At5g64400.24864e-047

Arabidopsis top hits (Blast detail)Scoree value
AT5G64400.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G09570.1); Has 218 Blast hits to 216 proteins in 80 species: Archae - 0; Bacteria - 10; Metazoa - 66; Fungi - 60; Plants - 47; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink).6386e-067
AT5G64400.2 unknown protein4863e-049
AT5G09570.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64400.1); Has 141 Blast hits to 141 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 40; Fungi - 31; Plants - 42; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink).4649e-047

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
124  25%
 
85  31%
 
183  19%
 
202  13%
 
102  13%

Unigene MembersMember information