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Information for unigene UN21484

FASTA Sequence
Unigene ID: UN21484Length: 1470 SSRSNP
GGGAAGAAAAGCATCCATCCGCCTTTCCCAGACACGGTGACGATAGAGAGGAAGGGAGCGGGGGAGAGACAGTTTCAGGGGCCCGA
TTTGGTTTCCCTGAAAGAAAAGATTAAATTTTCGTCTTTCAACATTCTTTCCCTTTTCTCTCTTTTCCCAGATTTGTCTAATCGAA
TCCATTCTCAAAGGCTTTTGCTCCTGTTAATTGAGTTTGAAAGAAAGGAATCTTCATTTCTGGGAAGATAGATTTCTATAAAGCAA
AAACATAAAGGAAGGGGATTTTTTTGACCTAATTTTTTTTTTTTTGAATTTAGGCGATTTTGTATTTGTTTCTTTTTTTATAATCA
ATTTGTGGGTGGAAATGGAGACGTATAGTATGGAATCGTCGACGAGAAGCAGTCAGAACGATGAGATCCATCACAACGGAGGAACT
TTCCACTTCTCTTCCACCAAGACCCACTCCTCCGCCGCTTCTCCCACCGTCGTTACCAATATCGTCGGTCCCACCGCAACTAGCGT
CTACGAGCTCCTCGAGTGCCCTGTCTGTACCTGTTCTATGTACCCTCCTATCCATCAGTGTCATAATGGACACACGCTATGCTCGA
CCTGTAAAGTGAGAGTGCATAACCGGTGTCCCACTTGTAGACAAGAGCTTGGAGACATAAGATGTTTAGCTCTCGAGAAAGTTGCC
GAGTCCCTTGAGCTGCCTTGCAAGTTTTACAACCTCGGATGCCCCGAGATTTTTCCTTACTACAGCAAACTCAAGCACGAGTCTCT
CTGTAACTTCAGACCTTACGGTTGTCCTTACGCTGGCTCTGAGTGTGGTGTCGTTGGAGACATCCCTTTCCTTGTATCCCATCTCA
GGGATGATCACAAAGTCGACATGCACGCTGGTTCCACTTTTAACCACCGTTATGTCAAGTCCAATCCGCGTGAAGTAGAGAACGCT
ACTTGGATGCTAACCGTGTTTCAGTGCTTTGGGCAATACTTCTGCCTCCATTTTGAGGCGTTCCAGCTCGGGATGGGTCCGGTATA
CATGGCGTTCCTGAGATTCATGGGGGACGAGGAAGAGGCACGGAGCTACAGCTACAGCTTGGAAGTGGGAGGCAGTGGGAGGAAGC
TAACATGGGAAGGAACACCGAGAAGCATCAGAGATAGCCACAGGAAAGTAAGAGACAGCAACGACGGTCTCATCATCCAGAGAAAC
ATGGCTCTCTTCTTCTCCGGTGGAGATAGGAAAGAGCTTAAACTTAGAGTCACCGGTAAAATCTGGAAAGAGCAACACAGTCCAGA
TTCTGGGCTTTTCATGCCAAACCTATCTTCCTAATCATTCATGCTTTCTCCTTTTTTTCTCTCTCTCTCTCTCTCCGAGAACGAAA
GTTGTATGATGGATTTGTTTACACGCTCTTCTTCTTTGTCTGTATCTAAAACGTATCTTGAATGAATGAATGAATGAATGTGTTTG
ATCTTATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_194517 E3 ubiquitin-protein ligase SINAT4 [Arabidopsis thaliana]15793e-173
XP_002869535 predicted protein [Arabidopsis lyrata subsp. lyrata]15768e-173
ACU18504 unknown [Glycine max]14012e-152
XP_002267317 PREDICTED: hypothetical protein [Vitis vinifera]13974e-152
XP_002318423 predicted protein [Populus trichocarpa]13966e-152

Swiss-Prot top hits (Blast detail)Scoree value
Q9STN8 E3 ubiquitin-protein ligase SINAT415791e-174
Q8S3N1 E3 ubiquitin-protein ligase SINAT513702e-150
Q84JL3 E3 ubiquitin-protein ligase SINAT313497e-148
Q9M2P4 E3 ubiquitin-protein ligase SINAT211751e-127
P93748 Putative E3 ubiquitin-protein ligase SINAT111606e-126

TrEMBL top hits (Blast detail)Scoree value
B3LF90 At4g2788015792e-173
C6T9K2 Putative uncharacterized protein14011e-152
B9I5C4 Predicted protein13964e-152
B9RSF5 Ubiquitin ligase SINAT3, putative13902e-151
A9PEZ7 Predicted protein13874e-151

Arabidopsis top hits (Blast detail)Scoree value
AT4G27880.1 seven in absentia (SINA) family protein15791e-175
AT3G61790.1 seven in absentia (SINA) family protein13496e-149
AT3G58040.1 SINAT2 (SEVEN IN ABSENTIA OF ARABIDOPSIS 2); protein binding / ubiquitin-protein ligase/ zinc ion binding11759e-129
AT2G41980.1 seven in absentia (SINA) family protein11605e-127
AT5G53360.1 seven in absentia (SINA) family protein10413e-113

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
84  44%
 
113  33%
 
122  22%

Unigene MembersMember information