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Information for unigene UN21503

FASTA Sequence
Unigene ID: UN21503Length: 918  SNP
GGGATAAGTCGTTTTGGATAAAACACTCTCTTCTCTCCATCCTCCTCTTGGAGCAGAGCTCCGTCGTCAATCCTAGCAAGCAATGG
CTTCCTCAGTCGTCACTTCTTTTCAACCCAGGTCATCATTTTTGGGCGATAGAAACGTGTTCAAGGTCACAACCAAGCCGATTGCT
AGAGTGGGTTTCTCCAGCAAGACCATAGAGTGCAAGGAGTCAAGGATAGGGAAGCAGCCCATCGCTGTACCATCCAATGTAACCAT
CGCATTGGAAGGTCAAGACTTGAAAGTCAAAGGTCCATTAGGAGAGCTCGCTCTAACTTACCCACGCGAAGTTGAGCTCATCAAAG
AAGATGCTGGTTTATTGAGGGTCAAAAAAACCGTCGAAACTAGAAGAGCTAACCAGATGCACGGCCTTTTCAGGACGCTAACGGAT
AACATGGTAGTGGGAGTGTCAAAGGGCTTTGAGAAGAAGCTGATACTAGTGGGTGTCGGTTACCGTGCGACGGTGGAAGGGAAAGA
GCTGGTTCTGAATCTGGGGTTTTCTCACCCGGTGAAGATGCAGATACCGGATAGTTTGAAAGTGAAAGTGGAAGAGAACACGAGGA
TCACGGTGAGTGGATACGACAAGAGCGAGATAGGGCAGTTTGCTGCGACGGTGAGGAAGTGGAGGCCGCCGGAGCCGTACAAGGGT
AAGGGAGTGAAGTATTCAGATGAGATTGTGAGGAGGAAAGAAGGCAAAGCTGGAAAGAAGAAGTGATCATCTTTTGTTCCTTGTTG
TTGTGTATTTTACCCTTTCTATGTTAAATGTGTATTTGCGCAAATCTTTTTTTATGAAAAAAATGTGAAACTTTTCCCCATGATTC
ACTGGTTGCGAACTTACTGAGAAAAAACAAATCTTGTGGTAAAAAATCTTGTTGTGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892273 EMB2394 [Arabidopsis lyrata subsp. lyrata]10721e-114
NP_172011 50S ribosomal protein L6 [Arabidopsis thaliana]10711e-114
NP_001147133 50S ribosomal protein L6 [Zea mays]10683e-114
BAH20405 AT1G05190 [Arabidopsis thaliana]9662e-102
XP_002279657 PREDICTED: similar to EMB2394 (EMBRYO DEFECTIVE 2394); structural constituent of ribosome [Vitis vinifera]9251e-097

Swiss-Prot top hits (Blast detail)Scoree value
O23049 50S ribosomal protein L6, chloroplastic10716e-116
A8M514 50S ribosomal protein L64677e-046
A6W5V3 50S ribosomal protein L64604e-045
Q0S3G1 50S ribosomal protein L64604e-045
C0ZW41 50S ribosomal protein L64596e-045

TrEMBL top hits (Blast detail)Scoree value
B6SL57 50S ribosomal protein L610682e-114
B9DI38 AT1G05190 protein (Fragment)9661e-102
C6TB89 Putative uncharacterized protein8917e-094
C6TKM8 Putative uncharacterized protein8882e-093
B9IAF0 Predicted protein8622e-090

Arabidopsis top hits (Blast detail)Scoree value
AT1G05190.1 emb2394 (embryo defective 2394); structural constituent of ribosome10724e-117
AT2G18400.1 ribosomal protein L6 family protein2463e-021

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
817  41%
 
67  17%
 
129  22%
 
95  12%
 
113  7%

Unigene MembersMember information