Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN21507

FASTA Sequence
Unigene ID: UN21507Length: 1323 SSRSNP
TTTTTGATTCCGATTCAATACTTTCTGGACGCGATTTGTCTTTTCCCGAATAAGAATTTTGAAGTTAGAAATTAATAAATAATCCT
TCTTTTAATTTTCCACTAATATCAAATCGTAGAATATTGTTCCCACCATTCTTATCATCATCTCCTTGGCGTCATTCGATTTTTTT
TTTTTAAATCCTGTAATAATATAATTTTCTTCCGACATTGGCGTCTCTCTCTCTCTCTTGAAGCATTCCCAAATCAAATCTGTGTT
CTTGAGATTCAGATGTATCCTTCTCTTGACGATGATGATTTCGTCTCTGATTTCTTTTGCTTCGATCAAAGCAATGGAGCAGAACT
CGATGACTACACACAGTTTGGTGTAGATTTGCAGCCTGATCAAGCAGATACCTTCCCAGATTTCGGGTCATACGGTGTCAATCTAC
AGAACGACCCAGAACAAGTTTTCAGCATTGGAGATTTAACATCGTACAATGGAGTTTTAGCGCAAGAGCCAGGGCAGTTTCGTAAC
TTTGGTGGACCAAATGATTGTGGAACTGTGCGGGAAGATGTAGTAGTTGTTAACTCTGGCTCATCTGGTGGTCCTGTTAAGCAAGA
ACAAGAACATGTTGATGAGGAATGCTCCAGAAAGCGGGGAAGGACTGGATCTTGTGTTAGACCAGGAGGAACCAAAGCTTGTCGTG
AGAGATTGAGGAGAGAAAAGCTAAATGAGAAGTTCATGGATTTGAGCTCGGTTTTAGAGCCTGGGAGGACTCCAAAGACCGATAAA
CCGGCTATTCTCGATGATGCAATCCGTGTCTTGAATCAACTCAGAGATGAAGCTCATGAGCTTGAAGAAACTAATCAGAAGCTTTT
AGAGGAGATCAAGAGTCTCAAGGCTGAGAAGAATGAGCTGAGGGAGGAGAAGCAAGCTTTGAAAGCGGAGAAGGAGAAGACGGAAC
AGCAGTTGAAGTCTATGATGGTTCCATCTACAGGGTTCATGCCTCAGATTCCAACTCCATTTAATCAGAACAAGATGGCAGTTTAT
CCGAGCTACGGTTACATGCCAATGTGGCATTACTTGCCTCAATCTGTTCGTGATACATCTCGTGATCAAGAACTCAGGCCTCCTGC
TGCTTAAACTCTCCATTACCTACATATTCTGTTTGGTACTAGAGAATTTAGAGAGATATCTAATCCACTTGGTTTTAGGATTCTTC
AGTTTGGCAAGTGTAAACGCTTTACTCTTTCTTTGTCTTGGGTTGTATTTTGAATAAAATGTGCACATTAACTCCAGAAACTTATG
GTTTCTTGCGGATTTTTTTGACTCATGTGTTGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34382 unnamed protein product [Thellungiella halophila]12371e-133
NP_567431 transcription factor bHLH104 [Arabidopsis thaliana]11851e-127
XP_002870316 basic helix-loop-helix family protein [Arabidopsis lyrata subsp. lyrata]11537e-124
NP_849383 transcription factor bHLH104 [Arabidopsis thaliana]11053e-118
NP_188962 transcription factor bHLH34 [Arabidopsis thaliana]6904e-070

Swiss-Prot top hits (Blast detail)Scoree value
Q8L467 Transcription factor bHLH10411856e-129
Q9LTC7 Transcription factor bHLH346902e-071
Q9C682 Transcription factor bHLH1154266e-041
Q9FH37 Transcription factor ILR33622e-033
Q9LT23 Transcription factor bHLH1212099e-016

TrEMBL top hits (Blast detail)Scoree value
B9HUA1 Predicted protein6132e-061
C6TAX5 Putative uncharacterized protein5683e-056
B9STH6 DNA binding protein, putative5658e-056
B9SA09 DNA binding protein, putative4393e-041
C6TH80 Putative uncharacterized protein4367e-041

Arabidopsis top hits (Blast detail)Scoree value
AT4G14410.1 basic helix-loop-helix (bHLH) family protein11864e-130
AT4G14410.2 basic helix-loop-helix (bHLH) family protein11068e-121
AT3G23210.1 basic helix-loop-helix (bHLH) family protein6911e-072
AT1G51070.1 basic helix-loop-helix (bHLH) family protein4274e-042
AT5G54680.1 ILR3 (iaa-leucine resistant3); DNA binding / transcription factor3621e-034

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
910  37%
 
125  19%
 
116  22%
 
84  15%
 
62  7%

Unigene MembersMember information