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Information for unigene UN21507
| FASTA Sequence |
| Unigene ID: UN21507 | Length: 1323 |
SSR | SNP | TTTTTGATTCCGATTCAATACTTTCTGGACGCGATTTGTCTTTTCCCGAATAAGAATTTTGAAGTTAGAAATTAATAAATAATCCT
TCTTTTAATTTTCCACTAATATCAAATCGTAGAATATTGTTCCCACCATTCTTATCATCATCTCCTTGGCGTCATTCGATTTTTTT
TTTTTAAATCCTGTAATAATATAATTTTCTTCCGACATTGGCGTCTCTCTCTCTCTCTTGAAGCATTCCCAAATCAAATCTGTGTT
CTTGAGATTCAGATGTATCCTTCTCTTGACGATGATGATTTCGTCTCTGATTTCTTTTGCTTCGATCAAAGCAATGGAGCAGAACT
CGATGACTACACACAGTTTGGTGTAGATTTGCAGCCTGATCAAGCAGATACCTTCCCAGATTTCGGGTCATACGGTGTCAATCTAC
AGAACGACCCAGAACAAGTTTTCAGCATTGGAGATTTAACATCGTACAATGGAGTTTTAGCGCAAGAGCCAGGGCAGTTTCGTAAC
TTTGGTGGACCAAATGATTGTGGAACTGTGCGGGAAGATGTAGTAGTTGTTAACTCTGGCTCATCTGGTGGTCCTGTTAAGCAAGA
ACAAGAACATGTTGATGAGGAATGCTCCAGAAAGCGGGGAAGGACTGGATCTTGTGTTAGACCAGGAGGAACCAAAGCTTGTCGTG
AGAGATTGAGGAGAGAAAAGCTAAATGAGAAGTTCATGGATTTGAGCTCGGTTTTAGAGCCTGGGAGGACTCCAAAGACCGATAAA
CCGGCTATTCTCGATGATGCAATCCGTGTCTTGAATCAACTCAGAGATGAAGCTCATGAGCTTGAAGAAACTAATCAGAAGCTTTT
AGAGGAGATCAAGAGTCTCAAGGCTGAGAAGAATGAGCTGAGGGAGGAGAAGCAAGCTTTGAAAGCGGAGAAGGAGAAGACGGAAC
AGCAGTTGAAGTCTATGATGGTTCCATCTACAGGGTTCATGCCTCAGATTCCAACTCCATTTAATCAGAACAAGATGGCAGTTTAT
CCGAGCTACGGTTACATGCCAATGTGGCATTACTTGCCTCAATCTGTTCGTGATACATCTCGTGATCAAGAACTCAGGCCTCCTGC
TGCTTAAACTCTCCATTACCTACATATTCTGTTTGGTACTAGAGAATTTAGAGAGATATCTAATCCACTTGGTTTTAGGATTCTTC
AGTTTGGCAAGTGTAAACGCTTTACTCTTTCTTTGTCTTGGGTTGTATTTTGAATAAAATGTGCACATTAACTCCAGAAACTTATG
GTTTCTTGCGGATTTTTTTGACTCATGTGTTGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34382 unnamed protein product [Thellungiella halophila] | 1237 | 1e-133 |
| NP_567431 transcription factor bHLH104 [Arabidopsis thaliana] | 1185 | 1e-127 |
| XP_002870316 basic helix-loop-helix family protein [Arabidopsis lyrata subsp. lyrata] | 1153 | 7e-124 |
| NP_849383 transcription factor bHLH104 [Arabidopsis thaliana] | 1105 | 3e-118 |
| NP_188962 transcription factor bHLH34 [Arabidopsis thaliana] | 690 | 4e-070 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8L467 Transcription factor bHLH104 | 1185 | 6e-129 |
| Q9LTC7 Transcription factor bHLH34 | 690 | 2e-071 |
| Q9C682 Transcription factor bHLH115 | 426 | 6e-041 |
| Q9FH37 Transcription factor ILR3 | 362 | 2e-033 |
| Q9LT23 Transcription factor bHLH121 | 209 | 9e-016 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9HUA1 Predicted protein | 613 | 2e-061 |
| C6TAX5 Putative uncharacterized protein | 568 | 3e-056 |
| B9STH6 DNA binding protein, putative | 565 | 8e-056 |
| B9SA09 DNA binding protein, putative | 439 | 3e-041 |
| C6TH80 Putative uncharacterized protein | 436 | 7e-041 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G14410.1 basic helix-loop-helix (bHLH) family protein | 1186 | 4e-130 |
| AT4G14410.2 basic helix-loop-helix (bHLH) family protein | 1106 | 8e-121 |
| AT3G23210.1 basic helix-loop-helix (bHLH) family protein | 691 | 1e-072 |
| AT1G51070.1 basic helix-loop-helix (bHLH) family protein | 427 | 4e-042 |
| AT5G54680.1 ILR3 (iaa-leucine resistant3); DNA binding / transcription factor | 362 | 1e-034 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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