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Information for unigene UN21520
| FASTA Sequence |
| Unigene ID: UN21520 | Length: 609 |
SSR | SNP | CACCCAATTTGCTGTCGTTGTTATTTTATTGATTAGGTTTACTCATAGGAATATGACCACCCAATTTGCTGAAGATTTATAATTTC
ACTTCAAGATTATTCAGTTTCTATTTTTTATTCGAAACCCATTGGTTTTACAGCAACTGGCAGAACGAAACAAGAAAACTTCGAGT
TTTTATTCATTAAATACTATATTGTCGTTGATCTCCCTCCCTGCTTCTCATAGATATAACAACGTCCATATCATCAGTTGCATGAA
AGTGTAGGGATGTTGCAGCGAGTGGGAAGCCTAGAGGCAATGCGAAATGTGTTGCAAATGCAGTCGCTCGGCACTGCCTCAAGAGC
ATTGCAACACTCGGCACTCGGGTTCGTCGTGTCTGCTCCTGGAACTACAAACTCACCACACACGTTCAGTCCACTCAAGTGGGTAT
TGCAGCTCTGTCCATCCACCACCGTCACCACCAAGACCACAGCCACCATCACCACCAGCTTCATGATTGTGGAAGATTTGGAAGAG
CTGGAAATTGATACCATCTTCTTCTTCTTCTTTTCTTTTATGTATTCTAAAAATATATGATTTTAGAAGTGAGACTGTTGTTTGTT
AGATATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002864156 protease inhibitor/seed storage/lipid transfer protein family protein [Arabidopsis lyrata subsp. lyrata] | 382 | 5e-035 |
| NP_200029 bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like protein [Arabidopsis thaliana] | 376 | 2e-034 |
| XP_002321889 predicted protein [Populus trichocarpa] | 259 | 8e-021 |
| XP_002510832 MEN-8 protein precursor, putative [Ricinus communis] | 252 | 5e-020 |
| XP_002318831 predicted protein [Populus trichocarpa] | 246 | 3e-019 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q43495 Protein 108 | 238 | 1e-019 |
| Q38737 Stamen-specific protein FIL1 | 225 | 4e-018 |
| O24356 Protein MEN-8 | 216 | 4e-017 |
| Q05772 Tapetum-specific protein A9 | 183 | 3e-013 |
| O23810 Protein YY1 | 143 | 1e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LTK4 At5g52160 | 376 | 2e-034 |
| B9ID39 Predicted protein | 259 | 6e-021 |
| B9R9F7 MEN-8 protein, putative | 252 | 4e-020 |
| B9I4C6 Predicted protein | 246 | 2e-019 |
| B9R9F3 MEN-8 protein, putative | 240 | 1e-018 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G52160.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | 377 | 9e-037 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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