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Information for unigene UN21529

FASTA Sequence
Unigene ID: UN21529Length: 1102  SNP
CGAACCCGTATTGTAATCTCTTTCTTCTGTAAATCTGTAGAGAGATTACACTTCTTGTCCTATATATTTATATCATATCATATTAC
ATCATCTTCTGAGGTCCATAAACATTACACATTAAAACTAGAGAAATGGTACAACAATCTTTTTTTCTTTCTTCTCTTCACTTCTC
TATCTCTTACATCAATTTTCCTGCTTTACTTTTATACCTCTGCATCTTTTTGTTATTAAGAGTCTCTACATTATTAGTTTTTTTTA
ACTTACCTCAGTTTCTTTCTTTCTCACTTCTCTTCCTGTTTATATCCCAACACGACATGCTGGTCCACCCCTACCGGGTAACATCC
CAAATGCCGGCGACCTAGGCATTTGGCAGTTGAAAGAGTTGAAGGAGTCAGAGAGTGTAGAAGGAGTAGAATTATCATCATTATCA
GAAGAAGGAGACCACAGATCTGATCCATTATTGTCCACCGAATCAGCAAACAGAAGCAAATGATTAGTTGACGATGCAAATGGACT
ATCTGGCAAGCATTCCTCCAACTTCTCTTGTAGATTTATTGTATCATCATCAGATCCTTCTTTGGAACTTCCTTTCCCTATCTCTC
CTCCTGCTTTAACCCCACCTGGGCGTGGAGACACAAGTGTCTGGCTAAAAGGATTTGGAGAATGAATGTGTGTAGATGAGGAATTG
AGCTGGAAATGATTCTTGACGTCATGAAGCTGCAGATTCATTAGCCTTCTGCTTTGAAGCTCAAGAATCTCTTCTTCAAACTTACT
CCTCCAGATAACATCTTGGGGGTTGTTATAGAACCCTCTCCCTCCTAAAACATCTCTGGGGCTAGAATCAAGCCCTGTTGGGGACA
ATTCTAGCTCTGTTGTTTGGTTAGTTCTGTATTTGTCAGGGACTTTGCCTTTCTCCTTGTAAGGCTTAACAAGAACCCTTGAATCA
CACACAAAGTGAGGGTTCCCTTTGGCAAGAATGCTCTTGACAGTCTCAGGGTACAAAAAAGTCACAAACCCAAACATTCTCTTTTG
CTGATATGGTATCCTCACATCTTGAACTGGTCCAAAAGTACTGAAATAATGGACACATCTTCCTCCCTGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAM66020 unknown [Arabidopsis thaliana]11975e-129
NP_190763 zinc finger CCCH domain-containing protein 46 [Arabidopsis thaliana]11975e-129
XP_002877836 hypothetical protein ARALYDRAFT_485553 [Arabidopsis lyrata subsp. lyrata]11966e-129
AAL87320 unknown protein [Arabidopsis thaliana]11903e-128
CAN69883 hypothetical protein VITISV_031889 [Vitis vinifera]4628e-044

Swiss-Prot top hits (Blast detail)Scoree value
Q9SV09 Zinc finger CCCH domain-containing protein 4611972e-130
Q10LZ9 Zinc finger CCCH domain-containing protein 234113e-039
Q10M00 Zinc finger CCCH domain-containing protein 223924e-037
Q0D3J9 Zinc finger CCCH domain-containing protein 533503e-032
Q94CJ8 Zinc finger CCCH domain-containing protein 552903e-025

TrEMBL top hits (Blast detail)Scoree value
A5B9W5 Putative uncharacterized protein4625e-044
Q6T284 Predicted protein4511e-042
B9GWA9 Predicted protein4492e-042
B9RIF6 Nucleic acid binding protein, putative4421e-041
B9HNZ4 Predicted protein4195e-039

Arabidopsis top hits (Blast detail)Scoree value
AT3G51950.1 zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein11981e-131
AT3G51950.2 zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein11981e-131
AT3G63450.1 RNA binding / nucleic acid binding / nucleotide binding3315e-031
AT3G63450.2 RNA binding / nucleic acid binding / nucleotide binding3315e-031
AT3G21100.1 RNA binding / nucleic acid binding / nucleotide binding2903e-026

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
84  33%
 
123  25%
 
93  25%
 
71  8%
 
181  8%

Unigene MembersMember information