 |
Information for unigene UN21531
| FASTA Sequence |
| Unigene ID: UN21531 | Length: 958 |
SSR | SNP | CTATTTGAAGTATCAAGTACCCGACAAAAGGAGAAAAGAATGTGATGATGTTTTACCAAAAAACATAAACAAAAGCAATCATATAA
TCTTGGTAGAGAGTATAACACGCCACACGACATGAGTTTCAAAGTGCATGCAAACGAGAGAAGAGATTCAAATATATATATATAAA
ATGATGATAAACTGTAGTCTCGCCTCTGCCCCCAGCAAAAGTTTGGTTGACTATATATACCCCAAGACATCCAGAGAGAGTTGCAG
CTCACAGGATAGTGCAGCATGAATTCGTTTTCTTTGCTTGCTTGTAGAACATCTGGGATGCCATGCTCAAATCAGAGCTTTTCTCG
ACTAGGCTGTCCAGCTTCTCACCACGGGCTAGAACGCTATCAATGGTCTTATGAAGGATAATCTTGGTCTCATCCAACTCCCTCTG
GATTTTCAACAGCTTATCAGCCTCTGCTGGGTCCTGAAACTTGGTAAGAGCTTCGGCTAAGTAAGGCCAAGGCTGAGAGGAGTCTT
CTTTAGCAGACCTCCATGTCTCACCAAAACTCTTCTGGTACTCATCTATCACCTGATTGAGAAGAGAAAAGGCACTTCGAACAGGG
TAATGATCGTCCATGAATCCCACCGCACAAAGCCCATTCCTATTGTAAGCATGAACCTTGTACTCTTCGTGCTGGACGGACTGGCG
CTGGGAAGGAGGTGTTCGGCTAGCGACGGTGCGGCCTACGAAGACGACGAACTCCTTGACGCTGGATCGCTGGAAATAGCCAAAGT
GAGAGACGTCCGAGGCGTTTGCGAGGATGACTGGATCCGATGTTTCGGGGGCGGCCTTGAGAACGAGCAAGGCGGTGATCTTCATA
GCTTTCGGTGGTTCAAAGGTTGCGTGACGAGGAAGCGAGGAGACGGAGGAGGAGGAGGAGATGCGTTTTGGAACCTGGAAAAGCAA
AAGTCCGGTGGT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002864547 hypothetical protein ARALYDRAFT_495912 [Arabidopsis lyrata subsp. lyrata] | 997 | 6e-106 |
| NP_200614 VAMP-like protein YKT61 [Arabidopsis thaliana] | 987 | 8e-105 |
| XP_002309328 predicted protein [Populus trichocarpa] | 935 | 9e-099 |
| XP_002324554 predicted protein [Populus trichocarpa] | 932 | 2e-098 |
| XP_002523504 snare protein ykt6, putative [Ricinus communis] | 928 | 6e-098 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9ZRD6 VAMP-like protein YKT61 | 987 | 4e-106 |
| Q9LVM9 VAMP-like protein YKT62 | 825 | 2e-087 |
| Q757A4 Synaptobrevin homolog YKT6 | 487 | 3e-048 |
| Q6FW27 Synaptobrevin homolog YKT6 | 474 | 1e-046 |
| Q6C537 Synaptobrevin homolog YKT6 | 473 | 1e-046 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9HAR1 Predicted protein | 935 | 6e-099 |
| A9PAX2 Predicted protein | 932 | 1e-098 |
| B9SBY5 Snare protein ykt6, putative | 928 | 4e-098 |
| C6SYY8 Putative uncharacterized protein | 928 | 4e-098 |
| C6SVB1 Putative uncharacterized protein | 927 | 5e-098 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
